Scomber scombrus (Atlantic mackerel): 133985057
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Entry
133985057 CDS
T10651
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133985057 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133985057 (dmxl2)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133985057 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
133985057 (dmxl2)
RAVE complex
133985057 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_RIG_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
133985057
NCBI-ProteinID:
XP_062280598
LinkDB
All DBs
Position
1:complement(27450474..27490441)
Genome browser
AA seq
3061 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILASDFDCVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPLSTNPNKRHKQLNYQWQKTGQFFLDAITYNLAWDP
QGNRILAATERLQLWAPPLTDALIEEEDGQLTDDEPHPVLNDWKCVWQCKTAASVHIAKW
SPDGEYFATVGKDDCLLKVWYPTTGWRSAVVVQDLSDKKPPPVHFSFVYLAHPRSVTGMS
WRKTSKFMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQISENTHSFSSSLPGLAG
GKDKIQHALESIHHLKHLRRGRRRSSALVAHSELLPSQLGTQDAHTHRHIAHHANALCHF
HISASINPNTDIPSVLADSAVFNPDDGTGGGGFVVHWLNNKDLSFTSSMDLFMLQLRKFS
EQQLDQTTEDPLDPEGSTMKFDFDLDEMSDKASSELGEEGEPGEQGSNKASSPGSSSSMP
LPSMLLERKMETLTTEWNKSPDMLFTIHPTDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYACTLTEGGSAGAGEQGRMVQRISRSASASAGLGSPALAPS
SNSHPGTSPAVMMISKHVDGSLNQWAVTFAERSAFSNVLTVSHKFRYCGHRFHLNDQSCH
TVLPLLLTSSHHNALLTPPSAPGSLEGEQPPSFPLPKGLPRKQLRNAATRTFHDPNAIYS
ELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACFV
ASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQC
GANTQLLHVFQEDFILGYKPQTEPEAYTPAFPPGEEYQPAPFSEKFFLVVIEKDLNRNSV
LQMWHLHLKSVQACVDEPSPDYSFQSQLMVPNQVLNADSSPETSPVRPLPRSASTANLQS
ASKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRF
WHCAVEGDDGNNEDDRDNRVYRWEPWALMNEEKDNNSAVCVSGRPVAVSCSYIGRLAVAF
KQPRQGQLQGSGENFSMHVSIYECESTGGSEWVLEQTLHLDDFTRPSSTLDPRVSVDSNL
FVYSRSDLYMSRDHSSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGMVNEQTS
SKEGVAVITLPLGGSIKQGIRSRWILLRAVDLLSSVDGTPSLPVSLSWVRDGILVVGMDC
EMHVYAQWHQDKKPGEGEEGNLSSADIAGGQTSGSASVFEARARSKSVFEGSAAVDEALR
APSGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVR
DVEAGEGGARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYSLMLADLDTS
YKSAEEAAKGTKVADGEGGHKSSEDQYADLFQVQTVTTDDFVNFATEKPEKKSRVINLSQ
YGPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSTDKQYTGGE
ALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAM
QRADPQWSELRAVGVGWWIRNINTLRRMVEKVGKAAFQRNNDPLDAALFYLAMKKKAVLW
GLFRSQHDEKMTQFFKNNFTEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEV
LLEKMDDLQLAMIVARLYEADFENSSTCQGLLYEKVLGCNKDGSGYHCSRLHPDPFLRSI
AYWIMKDYTQALDTLLERIPKEDDENPDVMVKSCNPVVFSFYNYLRTHPLIIRRHFANPE
GTATTVGLTAEKSSADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKSGSSP
LSKASSKANLNSTQPLENGTQGGLDWASPAAPTPAWGGNDSLGGLDWSQPMVKVEEDDLK
LDWGVDKEDDEDDEDDGLTMKKPEAETKADGGSESIGHKLQREDSQGESEVDVIAEQLKF
RACLKILMTELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHTICNYKVEGKEENSEVERW
GECAASVDISDEALERIEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYC
SLHGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIAATKTVIANP
VLHLSNHIHDILHTITLMEIPPHPDIMDDRVNALHTLAASLSACVYQALCDSHSYSSQTE
ANQFTGMVYQGLLLSERKRLRTESIEEHITPNSAPAQWPGVSSLISLLTSAREEDQPRLN
VLLCEAVMAVYLALLIHGLGTHSSNELFRLAAHPLNNRMWAAVFGGGAKVIIRPKRPETP
PVAPPQPPAEDVDRYRRRFNMRMLVPGRPVKETPATPPPVPTERPAYREKFIPPELSMWD
YFVAKPFLPLSDSNALCDSDESGAEDDDDDDDAFLSDTQITEHSDPNSYSWTLIRLVMVK
LAHQSVKNFLPLTGLDFTDLPVVSPLSNAVLKTLENWEHLLLERMNKFDGPPPNYINTYP
TDLSAGGGPAILRHKAMLEPDNTPFKTKNHQSFPARRLWHYLVKQEVLQETLIRYIFTKK
RKQSESVDNHMDHVTPNCITGASGPNKVEADLGYPGGKAKIIHKESDIIMAFAINKANSN
EIVLASTHDVQEVDVSTLVAVQPYTWIGDDFDKESRSSDDIDHRSSHTNIAQASSVPFAP
PQMPVSASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNR
PQQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHTKT
CGDFAFITSSSLIATAGQSNDNRNVCLWDTLISPSNTMVHAFPCHENGATVLQYAPKQQL
LITGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDAFEDFFVTGSAEGNMKVWKLAGH
GLMHSFSTEHTKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNIPSLVDV
L
NT seq
9186 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtgctgacgggagctgtaaaccctggagattgctgctactcggtg
ggaagcgtgaatgacatcccgtttacggcctatggctcaggttgtgatgtagtgatcttg
gcgagcgactttgactgcgtgcagattatcccgggagctcagaatgggaacatacaggtg
ggctgtgtggagtgctcccaccagcttggcaggattgcagcatcctacggtaacacagtc
tgcatctttgagcctctttctaccaacccaaacaaacgccacaagcagcttaactatcag
tggcaaaagacaggacagttcttcctcgatgccatcacctacaacctggcctgggaccca
caagggaaccgtatcctagcagcaactgagcggctccagctgtgggctccgccactgaca
gatgccctgatagaggaggaggatgggcagttgactgatgatgagccccaccctgtcctt
aatgactggaaatgtgtctggcagtgcaagactgctgcatctgttcacattgccaagtgg
tctcctgatggggagtactttgcaacagttggcaaggatgactgtttacttaaggtgtgg
tatcccaccacgggctggcgttctgcagtggtggtccaggacctttctgacaaaaaacct
cctcctgtgcacttttcttttgtctacctggcccacccccgctcggtcaccggtatgtcc
tggaggaagactagcaagttcatgcccaagggttcagtgtgcaatgtgttgctgacatcc
tgtgaagatggtgtgtgtaggctgtggtcagagaccctgcttccagaagatagcctgctt
gggggacagatctctgagaacacacactccttcagctccagcctgccaggcctggcaggc
ggtaaggacaagatccaacatgctttggagtcaatccaccacctgaaacatctgcgtcgg
ggccggcgacggtcctctgctctggtggcacacagtgagctgctgccctctcagcttggc
acacaggacgcacacactcaccgccacatcgctcatcatgccaatgccctgtgtcacttt
cacatatctgccagtattaaccccaacacagatatcccatcagtgctggctgactctgca
gtgttcaacccagacgacggcactggtggaggaggctttgtagttcactggctcaacaat
aaggacctaagcttcacttcctccatggatctctttatgctgcagcttcgtaaattctct
gaacagcagctggaccagaccactgaagatcctctggacccagaaggatccactatgaag
tttgactttgacctggacgagatgtctgacaaagcttcctcagagctcggtgaggagggt
gagccaggggagcagggcagcaataaggcatcctcaccaggatccagctccagcatgcct
ctgccctcgatgctgctggagaggaagatggagactctgaccacagagtggaacaagagc
cccgacatgctgttcacaatccaccctactgatggctctttcctggtttggcatgtgaag
tatttggatgaattcaaccagggtatcttcagacaggttcaggtgtccttctcctcccgt
attcctgtggcatttcctacaggtgatgccaattcattgagtaaaaacatcctgatgtac
gcctgcactttgacagagggggggagtgccggggcaggggagcaggggaggatggtccaa
cgtatctctcgctctgcctcagcttcagcagggctgggttctcctgccctggccccttct
tccaactcccatcctggcacaagtcctgctgtcatgatgatctccaagcatgttgatgga
tctctcaaccagtgggcagtgacattcgctgagcgctctgccttctccaacgttttgacc
gtatctcacaagttccgatactgtggccaccgcttccatctgaatgaccaatcctgccac
acggtgctgccactgctgctcacctcttctcaccacaatgccctgcttacacctccctca
gcccctggcagcctggaaggagaacagcctccttcctttcccctaccgaaaggacttccc
agaaagcaacttcgtaatgcagctacaaggaccttccatgaccccaacgctatctacagt
gagctgatcctgtggagggtggatcatattggacccctgtcctgcactggaggggtgtct
gaactggcccgcatcaactctctccacacctctgccttcagcaatgttgcttggctacct
acactagtacccagctctgtacttggaacgtactgtaacagcgccagcgcctgctttgtg
gcatcggatggtaaaaacctgcgtctctatcaagctgtggtggacgccagaaaactgctg
gatgaactgtcagatcctgaaacttctaaactggtgggcgaagtgtttaacatcgtcagc
cagcagtccactgccagacctggatgtatcatagagttggacgtcattacaaaccagtgt
ggcgccaacacccagctgctgcatgtcttccaagaggacttcattctgggttacaagcct
cagacagaaccagaagcatacacacctgcctttccacctggtgaagaataccaacctgcc
ccattttctgagaagttcttcctggtggtgatagaaaaggatctgaacaggaactctgtc
ctacagatgtggcacctgcacctcaagtctgtccaagcctgtgttgatgagccaagccct
gattatagcttccagagccagctaatggttcccaatcaagttttgaatgccgactcatct
ccggagacctctcctgtcagacccctgccacgttcagcctccacagccaatttgcaatca
gccagtaaactcatcctcagctccaaactggtgtacagcaagcgacttgacctgccccat
ggggtggaggttaccagagcaaccccctctgcaggtcatctgagttcctcctccatttac
ccggtctgcttggctccctacctgattgttactacttgctctgactctcgcgtgcggttc
tggcactgtgccgtggagggtgatgatgggaataatgaggatgaccgggataaccgggtg
taccgctgggagccctgggcccttatgaatgaagagaaagacaacaacagtgctgtgtgt
gtgtcagggcggcctgtagctgtgtcctgctcctacatcggcaggcttgctgtggccttt
aaacagccacgacaaggacagctgcagggttctggagagaacttctccatgcatgtgtcc
atctatgagtgtgagtctactgggggctcagagtgggtgttagagcaaactctccacctg
gacgactttaccagaccctcatcaaccctggatccaagagtcagtgtggactccaacctc
tttgtctatagcaggtctgacctgtacatgagcagagaccatagctcgcccaacatcaag
cactatgtccacctggactggctgtcaaaagaggatggatctcacatcctcactgtgggg
gttggatccaacattcttatgtatggccgtatctctggcatggtcaatgagcagactagc
agcaaggagggggtggctgtcatcacccttcctctagggggcagtatcaaacaggggatc
cgctctcgctggatcctgcttagggctgtggacctcctgtcctcagtggacggcacccca
tcactgccagtttcgctgtcctgggtgagggatggcatcctggtggtgggcatggattgt
gaaatgcacgtgtatgcccagtggcatcaggacaagaagcctggtgagggagaggagggc
aacctctcatctgctgacattgctggaggtcagacttcaggttccgcttcagtgtttgag
gcgagagccaggtctaaaagtgtgtttgaagggagtgctgcagtggatgaggcccttcgt
gccccatcaggacttcaggaagggggactttttgaggcagctcactccctatcccctact
ctgccccagtatcatcccacccagctgttggaactcatggacctgggcaaggttcgacgt
gccaaggccatcctcgctcacctggtgaagtgtattgctggggaagttgctgtggtgagg
gatgtggaggcaggtgagggcggagcaaggagacatctgtcacggaccatcagtgtgact
ggcagcacagcaaaagacactatcgtggctggccgcgacgggggcagggattacaccgaa
atcaattccatccctcctctgcccctctactcactcatgttggctgacttagatacctcc
tacaagtcggcagaggaagctgctaagggaaccaaagtggccgatggcgaagggggccat
aagtcctcagaagaccagtatgctgacctcttccaggtgcaaacagttaccacagatgac
tttgtgaactttgccactgaaaaaccagagaagaagtctcgagttatcaacctctctcaa
tatggacctacctactttggaccagagcatgctcaggtgttgtccagtcacctcatgcac
tcgagcctcccaggactgaccagattagagcagatgttcttggtggcgctggctgatacg
gttgcaaccaccagtgctgaggtcaccagctccaccgataaacagtacacaggtggtgag
gctcttgatgaatgtggactgaggtacctgctggccatgcgccttcatacctgcctgctc
acctccctgccccccctctaccgtatgcagctgcttcaccagggtctatcaacttgtcac
tttgcatgggccttccactcggaggcagaagaagagctcctgaacatgatcccagctatg
cagagagctgacccacaatggtctgagctcagagctgttggagtgggttggtggatacgt
aacatcaacaccctgaggagaatggtggagaaggtgggtaaagctgcattccagagaaac
aacgaccctttagatgctgctttgttctacttggccatgaagaaaaaggctgtcctgtgg
gggctttttagatctcagcatgatgagaagatgactcagttcttcaagaacaacttcact
gaagaccgctggcgaaaggcagctctgaaaaatgccttctccctgctgggaaagcaacgc
tttgagcagtctgctgccttcttcctactggctggatcactcaaagatgcaatagaggtg
ttgctggagaagatggatgatctccagttagccatgatagtggcaaggctgtatgaggct
gactttgagaactcatccacctgccaaggtctcctttatgagaaggtcctcggctgtaac
aaagatgggagtggttaccactgttccagactgcatcctgaccctttcctccgcagcata
gcttactggatcatgaaggattacacccaagccctggacacactgttggagcgcattccc
aaagaggatgacgagaaccctgacgtgatggtgaaatcttgcaacccggtggtgttcagt
ttctataactatctgaggacacatcctctgatcatccgtcgccactttgcaaatccagag
ggcacagcaacaactgtgggcctgactgctgagaagagcagcgcagatgagatcaacctc
atagagcgcaaactgttcttcaccactgccaacgcacacttcaaggttggttgcccggtt
cttgccctggaagtgctctccaagattcccaaagttaccaagaaatctggctcctcaccc
ctcagcaaagcttcatccaaagccaacttaaactcgacccaacccctggaaaatggcact
cagggaggtttggactgggcttcaccagccgcacctacccctgcctggggaggaaacgac
agcttgggtggattggattggagccagcctatggttaaggtggaggaagatgacctaaag
ctggactggggtgttgacaaggaagatgatgaagatgatgaagatgatggtctgactatg
aagaaaccagaggctgagaccaaagcagatgggggctctgaaagcataggccacaaacta
cagagagaggactcacagggtgagtcagaggttgatgtaatagcagagcagctgaagttc
cgtgcctgtctaaaaatcctgatgacagagctgcgtacactggccacaggtttcgaggtg
gatggagggaagctccgctttcagctgtacagctggctggagaaagagatcgcagctatg
catacgatctgcaactacaaggttgagggaaaagaggaaaattcagaggtggagcgctgg
ggagagtgtgcagcatcggtggacatatcagacgaggccctggagcgtattgaggccggg
gcctatgagcgtcaccagatggagcgcagacgtcttcaggccaagcagcagcactctgag
agacgcaaggcatggcttaggaagaaccaggccctgctgagagtctttctctcctactgc
agccttcatggagccaaaggaggaggagtcacgtctgtacgcatggagcttctgttcctt
ctgcaggagagccagcaggagaccacagtgaagcagctgcagtctcccctgcctctgccc
acaaccctgcctctgctatcagcttgcattgctgctaccaagacggtcatagccaatccc
gttctccacctcagcaaccacatccacgacatcctccacactatcaccctcatggaaatt
ccgccacatcccgacatcatggatgaccgggtgaatgctctgcacactctagcagcatct
ctgtctgcttgcgtctatcaagcactttgtgacagccacagttacagcagccagacagag
gccaaccagtttacagggatggtgtaccagggcctcctactgagtgagagaaaacgactc
cgcacagaaagcatcgaggaacacataactcccaactccgctcctgcccagtggccaggt
gtgtcgtccctcatttctctgttgacatcagccagggaggaggaccagccaaggctcaac
gtgctgctgtgtgaagcggtcatggcggtttatcttgcattgctcatccatggcctgggc
actcacagcagcaatgaacttttccgcctggcagcacatcccctcaacaaccgcatgtgg
gccgccgtctttggaggaggagctaaagtcattataaggccaaagaggcctgagacccca
ccagttgctccccctcagcccccagcagaggacgtggaccgatacagacggaggttcaac
atgaggatgctggttcctggacgccctgtaaaggagacgccagccacaccacctcctgta
cccactgagagacccgcttacagggagaagttcattcccccagagctgagcatgtgggac
tattttgtggcgaagcccttcctgccactgtcagacagcaatgctctgtgtgactcagac
gaaagtggtgcagaggatgatgatgatgatgatgatgccttcctttctgacacacagata
actgagcactctgaccccaactcctacagctggactttgatccgcctcgtcatggtgaaa
ttggctcatcaaagcgtcaagaacttcctccctcttactggccttgactttacagatctg
ccagtcgtttcccctctcagcaatgcagtgttgaagactttagaaaattgggaacacctt
ctgctggagcgaatgaacaagtttgatggcccgcctcccaactacatcaacacttatcct
actgacctcagcgcaggaggcggccctgccatactgcgacacaaggccatgctggagcca
gacaatacacccttcaagacaaagaaccaccagtcctttccagctcgacgtctgtggcat
tacctggtcaaacaggaagttcttcaggagactttaatccgttacatcttcactaagaaa
aggaagcagagtgagtctgtagacaaccatatggaccatgtaaccccaaactgcataacg
ggagctagcggtccaaataaggtggaggcggatctgggctatccaggaggcaaggcgaaa
atcattcacaaggagtctgacataatcatggcatttgcaatcaataaggctaactccaat
gagatagtgctggcttccactcatgatgtccaggaggtggacgtgtctactctggtggct
gtccagccctacacctggataggggatgactttgataaggagtctcgcagctctgacgac
atagaccaccgttcctctcataccaacatcgcccaggctagctctgtcccctttgcacca
ccacagatgccggtctctgcatccatgccatggctcggtagcgggcagaccagcatggga
gccagtgtgatcatgaagaggaatctgaacaatgtgaagagaatgacatcccaccccata
tatcagtattacatgacaggggctcaggacggcagtgtgaggatgtttgagtggaacaga
cctcagcagcttatctgcttcagacaagcaggcaacgctagagtcacccgactctatttc
aactcccagggcaataagtgtggagtagctgatggagagggcttcctcagtctctggcag
gtcaaccagacatcctccaaccccaaaccctacctgagttggcagtgccacactaagacc
tgcggagattttgccttcatcacgtcctccagcctcatcgccacagccggacagtctaat
gataacagaaatgtatgcttgtgggacactctgatttcacctagcaatactatggtccat
gcgttcccctgccatgagaacggggccactgtgctgcagtatgctcccaaacagcagctg
ctgatcactggaggcagaaagggctttgtgtgcgtgtttgacatccgccagagacagctg
ctccacactttccaggcccatgactcagccataaaggccctcgcactggatgcctttgag
gacttcttcgtcactggatctgcagagggcaacatgaaggtgtggaagttagctggccat
gggctcatgcactcttttagcaccgagcacactaagcagtccatcttccgcaacatcggt
gccggcgtcatgcaggtggagacgcggcccggtaaccgcatcttcacttgcggagcagat
ggcaccctgaagatgagggtcctccctgaccgctacaatattcccagcttggttgatgtc
ctgtaa
DBGET
integrated database retrieval system
