Scomber scombrus (Atlantic mackerel): 133985081
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Entry
133985081 CDS
T10651
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133985081 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133985081 (usp24)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133985081 (usp24)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133985081 (usp24)
Ubiquitin system [BR:
ssco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133985081 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_RAD5A
UBA_7
Motif
Other DBs
NCBI-GeneID:
133985081
NCBI-ProteinID:
XP_062280624
LinkDB
All DBs
Position
8:complement(9448092..9483391)
Genome browser
AA seq
2634 aa
AA seq
DB search
METEEEQHITTLLCMGFPDPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGSGTSGEGENSGRTGTGGFDPPPAYHDVVDSERSNDENGNCSGGSMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLIASTCLARHGLADADENCKRFIDRCMPEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELVAERVKQDPVPVNLMGVLTMAFNPDNEYHFKNRMKACQRN
WAEVFGDEANMFAVSPSNTYQKEPHGWLVDLVNRFGELGGFTAIQTKLNADEIEIACVSA
LVQPLGVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPDLLSAIKLLCM
RFQRELVNVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVAKTVKNAIDTDKLL
DWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELSKIWKIQAGQSSTVIENI
HTIIAAAAVKFSFDQLTHLFVLIQKSWEIESDRVRQKLLSLIGRIGREARSETTTGKVLE
VLWELAHLPTLPTSLVQQALEEHLGILSDAYAVKETVKRSYIIKCIEDIKKNCTQEDTKG
SDTQSSFLTGTWGKRKANSLFKASQQSSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSI
IQDLKKNFEIVKLITGSLVCCHRLAVTASGNNGLSGSTMVDGRYTYQEYLDSHLRFLAFF
LQEASLYLVWNRAKELWECLVSGPDVCELDRELCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLSGMDFIWRIAMETPDEEI
ANEAILLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRYTGGFGSTKLVIIERLLLLAERYVITIEDMYSVPRTILPHG
ASYNGHPVTLHITYESTKDTFTLETHSNETIGSIRWKISEHLSCPVDNVQIFANDSVLTM
NRDQKLLSQLGFSDEQSLTVKSSGTGTPSGSSESSASASSSSSSAVFNSAYALEQEKSLP
GVVMALVCNVFEMLYQLANLDECRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQ
KTLFTLGQGSGSRSPSMGSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMP
TSDDEMAKTSSKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLL
VGQSMPASLDDDVIRDGDALSSRPFRNAGRTGRQLSLCGTPEKSSYRQMSLSERSSIRVE
EIIPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRETHGALLPQGVRT
RVSSTGSNCSSSSEGETTPTALHAGICVRQQFISIKDTIIAREALSLLVTCLQLRCQQLS
SFYNLPSVNDFIIDVLLGSPSGEIRRVACDQLYTLSQTDTSAFPDVQKPNLFLLSVVLTA
QLPLWSPTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEVLQVSAATMLEDEISWLD
NFEPSWSSEMETSEADNILLAGHLRLIKTLLSLCGNEKEHLGEQTSSLRPSLIQQLLDDF
LFRASRIIINTSNPTTSPAPSHDFHPKCSTASSRLAAYEVLVMLADSSLSNLRLITKELL
SMHHQSDPSLCKEFDYLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSI
EDDTDQPEESVFYQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTS
LVDQLDEHLKKMGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEI
SLDQFVRGEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKY
DEQIRFPWVLNMEPYTVSGMARQDCSGEGGEGRGDGTSGGSPRKKVTISENYELVGVVVH
SGQAHAGHYYSFIKDRRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSN
PYPDVRRRYWNAYMLFYQKISDQNSPVLPKKSRVSIMRQEAEDLTLSAPSSPDVSPQSSP
RPPRANNDRLTLLTRLVRKGEKKGLFVEKMPASIYQIVRDENLKFMRNRDVYNSDYFNFT
LSLASVNATKLKHADYQPMAKESLQLAVHFLFHTYLHTKKKLRVDTEEWMATVEVLLSKS
SEACQWMVQYLVGQEGREITRVCLLECSVREVRVVVASILEKTLESALHFGDPGVDGLTD
ALLSLLDKDVPENVKNCAQYFGLFSNFAQRGCGPCQLLLKHSAYRRMLIFLLGPNRQNNQ
NRRWSPAQAREFLHLHSTLALITLHTDLSSQRTQAPEGFKLRVSCVPASTPLLPLHSDIM
ASLFTPEGQPYLLEVMFAMRELSGPLALLIEMVTYCSYCNESFSLGVLQLLKTQLETAPP
HELKNIFQMLQELLVAEDTLQSQRLKYAFESEKGLLALMHQSNNVDSRRCYQCVKFLVTL
AQKCAPAKDYFKDLSGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKTFQRTISAQDTL
AYATALLNEKEQSGSSNGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7905 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaagaggagcagcacataacaacgctgctctgcatgggtttcccagacccc
gacgtgatacggaaagcgctccggctggcaaagaatgatatcaacgaggcagtcgcgctt
ctgactaacgaaagccccggactcggctatggatacgagccgatggagagcgggcctgcc
ccgggctcgggcaccagcggagagggggagaacagcgggcggactggcacgggagggttt
gaccctccgcctgcataccacgatgtagtggatagcgagaggagcaatgatgaaaatggg
aactgctctggggggagcatggagttccctaccaccaacctgtacgagctggagagccga
gtatttaccgatcactggtccataccttacaagagagaggagtccctgggcaaatgtctc
atcgcatccacctgcctcgcccggcatggtctcgctgacgctgatgagaactgcaagcgc
tttatagatcggtgcatgccggaggcctttaaaaagttgctgaccagcagcgcagtgcac
aaatggggcacagagattcacgagggaatctacaacatgctcatgttgctggtggagctg
gttgcagagagggtcaagcaggaccctgtacctgtcaacctgatgggagtcctgaccatg
gccttcaaccctgataatgagtaccattttaagaaccggatgaaggcctgtcagaggaac
tgggctgaagtttttggagatgaggccaacatgtttgctgtctctcctagcaacacctat
caaaaagagcctcatggttggctggttgatttggtgaatcggtttggagagttgggagga
ttcactgccatccagactaagctcaacgccgatgaaattgaaattgcttgtgtatcagct
ctcgtccagcctcttggagtttgcgccgaatacctcaactccagcctcgtccagcccatg
cttgatccagtcatccataagatgatcacatatgtgcagaacctggaggagaaggacctt
aaagacaagcgcctggtgagcatcccagacctgctgtcggccatcaagctgttgtgtatg
aggttccagagggagttggtaaatgtggtagatgacctgcggctggacacgctgctgcgt
atgctcaaaacgccccatttttctaccaagatgaactccctcaaagaggtgacaaagtta
atagaggagagcacggtggctaagacagtgaaaaacgccattgacacagataaactgcta
gactggctcgtagagaattcagtcctgtcaatagcactggagggtaacattgaccaggct
cagtactgtgagagaattaagggaatcattgagctgctggggagtaaactgtcgctggac
gaactctccaaaatctggaaaatacaggccggccagtcatcaactgtgattgaaaacatt
cacacaatcattgctgctgctgctgtgaagttcagctttgatcaactcacccacctcttt
gtgctcatacagaagagctgggagattgagagtgaccgcgtgaggcagaagctgctcagt
ctgatcgggaggatcggcagagaggctcgctctgaaactacaacaggaaaggtgttggag
gtgctgtgggagctggcacacctccccaccctgcctaccagtctagttcagcaggcactg
gaggagcacctggggatccttagcgatgcctacgctgtcaaggagactgtgaaacggagt
tacatcattaaatgtattgaggacattaagaagaattgtactcaggaggacactaaaggc
agcgacactcaaagttcatttcttactggcacttggggaaagaggaaagctaactcttta
ttcaaagcctctcagcagagcagtcctcaggcagtctgggttgttcctgctctccgtcag
cttcacgagatcacccgttctttcataaagcagacttatcagaaacaagacaagagcatc
atccaggacttgaaaaagaactttgagattgtgaaactgatcacgggatccctggtgtgc
tgccatcgactcgctgtgactgcttcgggtaataacggcctctcgggatcgactatggtg
gacggacgatacacttaccaggagtatctggacagccacctgcgcttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagggccaaggagctctgggagtgcctg
gtttccggcccggatgtctgtgaacttgaccgcgagttgtgttttgagtggttcaccaaa
ggacaacacgacctcgagagtgatgttcagcagcagctcttcaaggagaagatcttaaaa
ctggagccctatgagatcactatgaacggtttcaatctgtttaagaccttctttgagaat
gtcaacctgtgtgaccatcgcctgaaacgccaagggactcagctgtgtgtggaacgcctc
gacctctcagggatggattttatctggcgcatcgccatggaaacccccgatgaagagata
gccaatgaagcaatcctgctcatcatcacatatagctacaccaacctcaatcccaagatg
aagaaggattctgtgtcattgcataagaagttcatcgccgattgttacaagaggctagag
gcagccagttcggccctgggtgggcctactttaacacatgctgttactagagcaaccaag
atgctgacggccactgccatgccgactgtggccacgtctgtacaatcaccatccaggtac
acgggggggtttggatccactaagctggtaataatcgaaagactgctgctattggctgaa
cgctacgtcatcactatagaggatatgtactcagttcctcgaacaattctacctcatggg
gcctcgtacaatggacaccctgtcactcttcacatcacttatgagtcaaccaaagacact
ttcaccttagagacccacagtaatgagacgataggaagtatccggtggaagatatccgag
cacttgagctgtccagtggacaatgtccagatctttgccaatgatagtgtgttgaccatg
aatcgggaccagaagctgctgtcccagcttggcttcagtgatgagcagagcctgactgtg
aaaagttcgggcactggaactccctccggcagctccgagtcctcagcctccgcctccagc
agttccagctccgccgtcttcaactctgcctacgccttggagcaggagaagtccctgcct
ggtgtggtaatggcgctggtgtgtaatgtgtttgagatgctttaccagctggctaacttg
gatgaatgcaggattactcttcgtgtgagaaagctgctgctgctgatcccgacagatcca
gaagtgcaggacgccctcgacaactttgttcccaaagaatccagcgtctggagccatcag
aagacgctgttcaccctcggtcagggttcaggctctcgctctccatctatgggctccaag
cagcagcaccagcccagtgctgcatccatcttggagtccctgttcagatcgtcagccccg
ggcatgtccaccttcagagtgctttataaccttgaggtgttgagttcaaagctcatgccc
acgtctgatgatgagatggccaaaactagcagcaagtccttttgtgagaacttccttaaa
gcaggaggcctcagtctggtggtgaatgttatgcagagagattccatcccatcagaggtg
gactacgagaccagacaaggagtctactctatctgtctccagttggccaggttcctcctg
gttggccagagcatgcctgcatcactggatgatgatgtcatcagggatggcgatgcgctg
tcatcccgtccgttccgtaacgccggtcggacggggcgacagctgtctctctgtggaact
ccagagaagtcctcctacagacagatgtctttgtctgagcgctcgtccataagagtcgag
gagatcatacctgctgctcgtgtagctattcagactatggaagtgggagacttcacttcc
actgtggcctgcttcatgcgtttgacctgggcagctgcagcagggcgattggatctggtt
ggcagcccacagccaatcagagagacccatggcgcacttctgccacagggagtccgcaca
agagtcagcagtactggaagtaactgcagctccagcagtgagggcgagaccacgccgaca
gcgttgcatgctgggatatgtgtcagacagcagttcatctccattaaagataccatcatc
gctcgtgaggctctgtcactgttggttacttgtctgcagttgcgctgtcagcaactatca
tctttttacaaccttccctccgtcaatgatttcatcattgatgttctgctgggatctccc
agtggagagatccgccgtgtagcttgtgatcagctgtacactctgagccagactgacact
tcagccttccctgatgtacagaaacccaacttattcctcctgtcagtcgttcttactgct
cagctgccgctctggagtcctacatctgtcatgagaggggtcaaccagagattgctgtcc
cagtgcacagagtactttgaccttagatgccagcttctggatgatctaacaacttcagag
atggaggtgttacaagtgagcgccgccaccatgttggaggacgagatctcttggctcgac
aactttgagcccagctggagctctgagatggagaccagcgaggcagacaacatcctcctg
gcgggtcacctccggctcatcaagaccctgctctcactctgtggcaatgagaaggaacat
cttggtgagcaaacatcaagtttacgtccatctctgatccagcagttgttggatgatttc
ttgttccgagcctctcgcattatcatcaacacttccaacccgacaacttccccggcgccc
agccatgactttcaccccaagtgcagcacagccagcagcagactggcagcctacgaggtg
ctggtgatgctggcagacagctctctctcaaacctccgcctgatcaccaaagagttactg
tccatgcaccaccagtctgatccttcgctctgcaaagagtttgattatctgcccccggta
gaaagccgctcagtgtcaggttttgtcgggttgaagaacggtggagccacgtgttacatg
aatgccgtgttccagcagctctacatgcagcctggtctaccagaggctttcctgtccatc
gaggatgacacagaccagccagaggagagtgtcttctaccaggttcagtctttgtttggc
cacctgatggagagcaaactgcagtactacgtgcctgagaacttctggaagatcttcaag
atgtggaacaaggagttgtatgtaagagaacaacaagacgcttacgaattcttcactagc
ctggtggaccagcttgatgaacatctcaagaaaatgggccgagaacaaatcttcaaaaac
acctttcagggaatcttctctgaccagaagatttgtaaagactgtcctcaccggtatgag
cgtgaagaaacattcatggcactgaacctcggagtgacatcttgccaaagtttagagatc
tcattagaccagtttgtcagaggagaggtgctagagggcagcaacgcctactactgtgag
aaatgcaaggagaagaggaccacagtgaagaggacatgtattaaatccctgcccagtgtt
ctctgtatccacctcatgcgcttcggcttcgactgggaaagcggacgctctatcaaatat
gacgaacagatcaggttcccctgggtgctgaacatggagccttacaccgtttctggaatg
gctcgtcaagactgcagcggagagggaggcgagggccgaggcgacgggacttcaggaggg
tcgcccaggaagaaggtcaccatttctgagaactatgaacttgtgggagttgttgtccac
agtggtcaggcgcatgcaggacactactactccttcattaaagacaggcgtggtagcgcc
cgtggacgctggtacaagttcaacgacaacgtggtggaggagtttgatatgaatgatgaa
actttggaatatgagtgctttggaggagagtatcgccccaaagtttatgatcagtcgaac
ccataccctgatgtgcggaggagatactggaatgcctacatgttgttctatcagaagatc
agcgaccaaaactcacctgtcctgcccaaaaaaagccgagtcagcatcatgaggcaggaa
gctgaggaccttacactgtctgccccgtcctctcctgatgtttcgcctcagtcctctcct
cgcccccccagagccaacaacgaccgcctcaccctcctcacccgcctggtccgcaaagga
gaaaagaagggcctgtttgtggagaagatgcctgccagcatctatcagattgtgagagat
gagaatctcaagttcatgaggaacagagacgtctacaacagtgactacttcaacttcacc
ctctccctggcctccgtcaacgcaacaaagctgaagcatgcagactaccagcccatggcc
aaagagagtcttcagctggctgttcactttctcttccacacctacctgcacaccaaaaag
aaactccgtgtggacacagaggagtggatggcaacagttgaggtgttgctgtctaagagc
agtgaagcgtgtcagtggatggtgcagtaccttgttggacaagagggaagagagatcacc
agggtttgtctgttggagtgcagcgtgagggaagtgagggtggtggtcgcatccatcctt
gaaaagactctggagagcgcgcttcactttggagacccgggggtggacggcctgactgac
gccctcctctccttattggacaaagatgttcctgagaatgtgaaaaactgtgcacagtac
ttcgggctcttcagtaacttcgctcagaggggttgtggtccttgtcagttgttgttaaaa
cattcagcatatcgccggatgctcatcttcctgttgggacccaacaggcaaaacaaccag
aaccggcggtggagtccagctcaggctcgggagtttcttcacctccacagcaccctggcc
ctcatcactctgcacactgacctcagctcccagcggacacaggctccagaaggttttaag
ctccgtgtgagttgcgtcccagcctccacccctctgctccccctccactcagacatcatg
gcttcactcttcactccagagggacagccttacttgctagaggtgatgtttgctatgcgt
gagttgtctggccctctggctctcctgatagagatggtgacctactgctcgtactgtaat
gagtccttctccctaggagtgctgcagttactcaagacccagctggagacggctccacct
catgaactgaaaaacattttccagatgctgcaggagctacttgtcgcggaggacactctg
caatcccagagactcaagtatgcttttgagtcagagaaaggcctgctagctttgatgcac
cagagtaacaacgtggacagcagacgctgctaccagtgtgtaaagttcctggtcacatta
gctcagaagtgtgctccagctaaggattacttcaaagacttgtctggtcactggagctgg
gcagtacagtggcttcaaaaaaagatgactgaacattactggactccacagagcaacgtg
tccaatgagacatccactaataaaaccttccaacgcacaatatctgcacaggacaccctg
gcctatgccacagcgttgttaaatgaaaaggagcagtctggcagcagcaacggctctgac
ggcagcccagccaacgaaaacgcagaccgcagcctccgacaggggtcagagtctcccatg
atgctcggtgattcgaagagcgacctagaagacgtggacccctag
DBGET
integrated database retrieval system
