Scomber scombrus (Atlantic mackerel): 133985101
Help
Entry
133985101 CDS
T10651
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133985101 (si:dkey-183n20.15)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133985101 (si:dkey-183n20.15)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133985101 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4_2
TRAF3_RING
Zn_ribbon_RanBP
DUF1232
zf-Nse
Motif
Other DBs
NCBI-GeneID:
133985101
NCBI-ProteinID:
XP_062280652
LinkDB
All DBs
Position
8:complement(10428496..10433361)
Genome browser
AA seq
254 aa
AA seq
DB search
MNPHSSSQSRLDHLPSEGLAGQCHPGSSRSLVCQSEQSASAYMSCHKLCPSTSQQDWHCP
VCLQTANFPVQTNCGHLFCAPCLIAYWRHGSWLDAISCPLCRQKVSVLCHLFNESRSDRQ
SKEVLGEITDYNKRYSGAPRRVTDYLCDAPLLLQLLARGLGTIGGLVWLFFFRVALCCVG
TVVSISSTSLDSVSSSSNPLETDPSFCGLLGVLDDLVVVILLLICVININQQMAPERGHS
ANAATSQGVMGDSL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaacccccacagcagctctcagtccagactagatcatctaccttctgaaggtctagcg
ggtcagtgtcacccagggtcatcaagatctttggtttgtcaatcggagcagtcagcatca
gcgtacatgagctgccacaagttatgtccatccacaagccaacaggactggcactgtcct
gtgtgtctgcagacggccaacttcccagtccagaccaactgtggccatttgttctgtgct
ccttgtttgatcgcctactggagacatgggtcatggttggatgctatcagctgccctctc
tgtagacagaaggtcagcgtgctgtgccatctatttaatgagagtcgatcagaccgacaa
tcaaaggaagttcttggagaaatcacagattacaacaaacgttattctggagccccaaga
cgggtaacagactacctgtgcgacgcgcctcttctcctgcagttactggcacgtggcctg
ggcaccattggaggacttgtgtggctgtttttcttcagggtggcgctgtgctgcgtgggg
actgtggtgtccatctcctccacttctctcgactccgtctcctcatcgtcaaacccccta
gaaacagacccttccttctgcggactgctgggtgtcctggatgacttggtggtggtcatt
ctgctccttatctgtgttatcaatatcaaccagcaaatggcgccagagagaggacactct
gcaaatgctgcaacctcacaaggagtaatgggggattcactgtag
DBGET
integrated database retrieval system
