Scomber scombrus (Atlantic mackerel): 133985169
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Entry
133985169 CDS
T10651
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133985169 (hps3)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
133985169 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
133985169
NCBI-ProteinID:
XP_062280745
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All DBs
Position
8:complement(27466310..27481909)
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AA seq
1046 aa
AA seq
DB search
MVHVYNCHPFCSQQILQVEQEPRLVCCGGGVLFVVATGGCKVEAYNLEVEGCPLICRFAT
MGTVRSIQNSTIGDYLVTIEEKNSATYLRAYTNWRYQAEEKARVGVRLLGHLLRGASQRG
GVQMEIIEIPMSERPVAVACCPVTGDLLVGCHKTLVLFALRRPNQQNLNQSQQNLQSLGT
NTQQSSSQSQGQTSSSNQNISFLDFERSVILHLPGMKPKQVALCGGYVAVQAELEVLVLK
LDASTEPKSQDESSDPHKSDYLEDQADFLLLPKHGELLGDRAKDCDIPVSIEKTGLEDRA
QYTLSYVLFRRFTPDYFQGCSVDETQLHSLQLHPLFTSNQSVTADEPACIFCFFSLPTAG
YLYSLKGGVELISAYQYPEKVLEAVLTDHLLHVITKSALQCFTVRCAAVAARIEDPYIDS
TMRACPPSSLEVCALRMQLFIGLRSVCVFGRHVVLLSAADAETPEETERNNQRRSQSRKW
TVSSPKETSTAGHGWNLYVVDTVSPITLYQEMVEYSQRYAETNPQAQSLRHLFSEAHLLL
RASLLQPSEQQQNSEGVPAVSLQTDTDRQPERQTAAQTDRQELEKALRENCAQLGDCFSR
SSQKDCHLALPYYRMSGLSVTEVMVRNRPLPSSPHSYGAGFLFYLKHYLLEETEQILSQE
AADEVIDIFSQSEPSQLVSVCASPSMTNVSPARTLQILRHLEDSAGVSVPLTITMATMLL
RLDDLPQYAQLMERHTEMLLVYGFIEEPRLLLHGGGGGQHTRVQTTALSQQLAKSQPGLL
VAGMVALHENNKVQLEQADHIFKELGCENCLQVDFWEGMLMASSQEAVIQELLFRVSSVY
IDRLTQTNSDTHTNPPHRRPTRRSLKSADDLINSCTHYGALYPWLTVLSPAHTTSSQHQE
ALHKLQSLLCGPSLSVGSVIPLLERLSDETLWGFSLHLLCTTRRGQYDCSIEKLLDRCPQ
AIIAYANHQLQDKYMALWWQKLLPELCNRTRAAADNSILLAALKETLVVVAMETSPSEFL
ELIPDDGTASYFLPHLLTCSQRHLLA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtctacaactgccaccctttctgctcacagcagatactacaggtggagcag
gagcctcgactggtctgctgtggaggtggagtgctgttcgtcgtggccactggaggatgc
aaggtggaggcctacaatctggaggtggagggctgccctctcatctgtcgctttgccacc
atgggcactgtgaggagcattcaaaacagcacaataggagactatttggtgaccattgag
gaaaagaacagcgccacctacttgagagcctacaccaactggcggtaccaggctgaggag
aaggcccgtgtcggggtgcgcttgttgggtcacctgctgcgtggggcgtctcaacggggc
ggagtacagatggagatcattgagatccctatgtcagagcgccctgtcgccgtggcgtgt
tgcccggtaacaggtgaccttttggtcggctgccacaagacgctggttctgtttgctttg
aggagaccgaaccagcagaacctgaatcagagtcagcagaatcttcagagcttggggacc
aatactcagcagagctccagtcagagtcaaggtcagacctcaagttcaaaccagaatatt
tcctttttggactttgagcgctccgtcatcctgcatctgccaggaatgaaacctaaacag
gttgcgctgtgtggaggatacgtggcggtgcaggcagagctggaggtgctggtgctgaaa
ctagatgcatccactgaacctaaaagccaggatgaatcatcagacccacataaaagtgat
tatctagaagaccaggctgactttctgctccttccaaaacatggagagttgctcggtgac
cgagctaaagactgcgacatccctgtcagcatagaaaagaccgggctggaggacagggca
caatacacgctgtcctatgtgctcttcaggcgttttactccagactacttccagggctgc
agtgtggatgagacacaacttcactctctacagctccacccactgttcaccagtaaccag
tcagtgactgctgatgaaccagcatgcatcttctgcttcttctctcttcccaccgccgga
tacctatacagtctgaagggtggagtcgagctcatctcagcctatcagtatccagagaag
gtcctggaggcggtgctaacagaccatctgctacacgtcataaccaagagtgctttgcag
tgctttacggtgcgctgtgctgcagtagctgccaggattgaagacccttacatcgattcc
accatgagggcctgtccgccctccagcctcgaggtgtgtgcgctcaggatgcagctgttc
attggcctgcgttcagtgtgtgtcttcggccgccatgtggtgctgctctccgccgccgat
gcagagacaccagaggagaccgaacgcaacaatcagcgcaggagccagagcaggaagtgg
acagtctcatctcccaaagagaccagcacagccggacatggatggaacctctatgtggtc
gacaccgtctcccccatcactctctaccaagagatggttgaatacagccagcgttacgca
gagaccaacccacaggcccaaagtctgcggcacctcttcagtgaagctcacctcctcctc
cgcgcctccttactgcagccatctgaacagcagcagaacagcgagggcgtcccagcggtg
tctctgcagacagatacagacagacagcctgagagacagacagctgcgcagacagacaga
caagaactggagaaggcgttaagggagaactgtgctcagctgggagactgtttcagcagg
agcagccagaaggactgtcacttggctctaccttactacaggatgtctggtctgtcagtc
acagaggtcatggtcaggaaccgcccccttcccagcagcccccattcctacggcgccggc
ttcttattttacctgaagcattacctgttagaagaaacagagcagatcctcagtcaggaa
gcagctgatgaggtcatagacattttcagccaatcagagccctcacagctcgtcagcgtg
tgcgccagcccatccatgacgaacgtcagtcctgcacggacgctgcaaatcttgcgacat
ctggaggacagcgctggcgtgtcggtgccactgacaatcaccatggcaaccatgctgcta
cgcttggacgacctgccacagtacgcgcagctgatggagagacacactgagatgctgctg
gtttacgggttcatcgaggagccgaggctgctgctgcacggtggaggtggaggccagcac
acacgcgtgcaaaccacagcgctgagtcagcagctggcaaaatcccagccaggactgctg
gtggccggcatggtggcgctgcatgagaacaacaaagttcagctggagcaggccgaccat
atattcaaggagctgggctgtgagaattgcttacaggtggatttctgggaggggatgctc
atggcctcgtcacaggaagctgtcatccaggagcttcttttccgagtgtcttctgtctac
atcgaccgactgacacagacaaactcagatacacacaccaaccctccacacagacgtcca
acacgcaggtcattgaagagcgcagacgatctgatcaactcgtgcacgcattacggtgct
ctgtacccgtggctcactgttctcagtccagctcacactaccagctctcaacaccaggag
gcgttacacaaactgcagtctctgctgtgtggtccgtccctgtctgtgggctctgtcata
cctctgttggagcgtctctcagacgaaaccttatggggcttcagcctgcacctcctctgc
accaccagaagggggcagtacgattgcagcattgaaaagctgctggaccgttgccctcag
gccatcatagcctacgccaatcaccagttacaagacaaatacatggcgttatggtggcag
aagctgctcccagagctttgtaaccggacaagagctgctgcagacaacagcatcctactg
gctgctcttaaagagacactggtcgtggttgccatggagacgagcccttctgagttcctg
gagctgatacctgacgacggcaccgcctcatacttcttgcctcacctgttgacatgtagc
cagagacacctgcttgcatga
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