Scomber scombrus (Atlantic mackerel): 133985231
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Entry
133985231 CDS
T10651
Symbol
tdrd5
Name
(RefSeq) tudor domain-containing protein 5
KO
K18407
tudor domain-containing protein 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133985231 (tdrd5)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
133985231 (tdrd5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
OST-HTH
TUDOR
Cas_csx3
Motif
Other DBs
NCBI-GeneID:
133985231
NCBI-ProteinID:
XP_062280812
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Position
8:complement(22378586..22401849)
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AA seq
898 aa
AA seq
DB search
MNQEEVLAKLKKDIRSLLISSKMGLEPDQLRRDYGNMLGHPMPLKVLGFRNILDLVKEMP
DVVSLQFRSDGSPLLKAVSDESTRNIENLVARQRVSKFNKKSSRRGANYFSPRYSHFSTS
VVLPRRGRAPPALPATLRAQMRLLLSQGPLRLSELDASFLRCFGHPLRVHSYGFFSTGEM
LEAAADLVCIQQSRLGSVLTLREYMLPRPILRLSNSPQRTGAIKPASPTTDKSVAKGPDS
KAPTPTKPPAEVPVKQSPLSGPAMKTTFEKKQDSEPELFQKRVLKLEEELRQQILENGVA
GTISQELKDKLQKVVAQTSGGLSVHDLPAEYKRLCGEDLPLLQSGFVSVTELVGAMSDIF
HLKPAGDNDGHHLIVMDIQDSERTQTDSRETVSFGDCVKKPFMSYYFSCGQSSWEGKLKG
DDDDDDDNVSVVDQNEELKTRDNSKTQEMVSHSAVPLDALQSQHLKPPTRHRAQELVEVL
VGQVESPGHFYIRFSESEEARVMEDMMIEMRRCYTSPEVSERYHLPERFVRRGQVCCVSP
KGMWFYRVVIHQVISATQVKVYYVDFGDMTVVQSASLKFLKSCYSILPAQAVPSSLAGIK
PTTGSWTAEATASFQKLCSDRTLVGALDRYNGDTLQVYLCDTHTDNDIYIHTLLLSRGHG
TACSPLASAALCVKTNPVSLYLGEGMVDLPEVEQETPSCPKPADNHEQSMSATLEVEEKE
VPALEFIEDNEDSSHMQDKDANPFSALLNDQTLSCSELGWALNNPTSPTSNHLAPPDLIQ
AERIPAHYKADVKMLSLTMPPTQCRVNPFCSTPKDAKVTAPFLVKQPSILRTLSLHTPAL
GQIQDYSLVGPIGTVGRICTTKDSQLYNISGMNMVKAIHIDNVTKQASTVQSYKAAER
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagaagttttggctaagctgaagaaggatattcgctccttactcatttca
tctaagatgggcttggagcctgaccagctcaggcgggactatgggaacatgttggggcac
cccatgcccctgaaagtcctgggcttcagaaacatcctcgatttggtgaaggagatgccc
gacgtggtgtcacttcaattcagatcagatggcagtccactcttaaaagctgttagcgac
gagtctacccgaaacattgagaatctggtagccaggcagcgcgtgtctaagttcaacaaa
aagagcagtaggagaggtgccaactacttctcgccccgctactctcacttttcaacctct
gtggtccttcccagacgaggccgtgctcctccagccctcccggctacactgagggcacag
atgcgcctcttactctcccagggtcctctcaggttgtcggagctggacgccagcttcctt
cgctgctttggccacccgctgcgtgtacacagctatggcttcttctccactggagagatg
ctggaagcagcagcggacttggtctgtatccagcagagcaggctaggctcagttctgacc
ctgagggagtacatgctgcctaggcccatactcagactgtccaattcaccacagaggact
ggagcaataaagccagcatcacccacaactgacaagtcagtcgccaaagggccagactcc
aaagctccgacaccaacaaaacccccagctgaagtcccagtaaagcagagtcctctgagt
gggcccgctatgaagacaacatttgagaagaagcaggactcagaaccagagctctttcag
aaacgtgtcctgaagctggaggaggagcttcgccagcaaatccttgagaatggagttgct
ggcaccataagtcaagagctgaaggacaagttacaaaaggttgtagctcaaaccagtggt
ggattatcagtgcatgatctgcctgcagagtacaagaggctttgtggcgaggacctgccg
ctgctacagagtggttttgtcagtgtcactgaactggttggtgccatgagtgacatcttt
cacctgaaacccgcaggggataacgatggccaccacttgatagtcatggacatacaggac
agtgaaagaacacaaacagattcaagggagactgtcagttttggtgattgtgtgaagaag
ccatttatgagctactactttagctgtggacagtcctcttgggaaggcaaactgaaagga
gatgatgatgacgatgatgataatgtctcagtggttgaccagaatgaagagttaaagacc
cgagacaattccaaaacccaagaaatggttagtcactctgctgtgcccctggacgccctg
cagagtcagcatcttaaaccgccaactcgccatagagctcaagagctggtagaggtcctg
gtgggacaggtggagtcacctggacatttctacatccgcttcagtgagagtgaggaggca
cgagttatggaggacatgatgattgagatgagacgatgttacaccagtcccgaagtgtca
gagcgctaccacctccctgagcgatttgtccggcggggtcaggtctgctgcgtgtcaccc
aaaggaatgtggttctaccgggtggtgatccaccaggtcatcagtgccacacaggtcaag
gtgtactacgttgattttggcgatatgaccgtggtgcagagtgccagcctcaagttcctc
aagtcttgttattcgattcttccagcacaagctgtcccgtcatcactcgctggaattaaa
cctaccactggcagctggactgccgaggccacggcttctttccagaagctgtgctctgac
cgcaccctggtgggcgctctggatcgttacaatggagacaccctacaggtctacctgtgt
gacacacacactgataacgacatctacatccacactttactgctgagccggggtcacggg
acagcctgcagccccttggccagtgcagcgctgtgtgttaagaccaatccggtgagtctc
tacctgggggaggggatggttgacctgccagaggtagaacaagagaccccttcctgtccc
aagccagcagacaatcatgaacagtccatgtcagccacattggaggttgaagagaaagaa
gtgccggctctggagtttattgaggacaatgaggacagctcacacatgcaggataaggac
gccaaccccttcagcgctctgctgaatgaccaaactctcagttgcagtgaattgggctgg
gccttgaacaaccctaccagtcccacttccaaccatcttgcccctccagatttgatccag
gctgagagaatcccagctcactataaagctgatgttaaaatgttgagcttgaccatgcca
ccaactcagtgcagggttaatcccttctgttcaacacccaaagatgcgaaggtcacagcc
ccttttttggtcaagcaaccttcaatcctgagaaccctgagcctccacacccctgcccta
gggcaaatccaggactattctcttgtcggtcccattggtacagtaggcaggatttgtaca
acaaaagacagtcagctatacaacatatcagggatgaacatggtcaaagccattcatata
gacaacgttactaaacaggccagcactgtgcagtcttacaaggctgcagagcgctaa
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