Scomber scombrus (Atlantic mackerel): 133985303
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Entry
133985303 CDS
T10651
Name
(RefSeq) WD repeat-containing protein 18-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
133985303
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
133985303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
EIF3I
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_NWD2_C
WDR55
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WDR54
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
133985303
NCBI-ProteinID:
XP_062280880
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All DBs
Position
8:32764405..32772874
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AA seq
276 aa
AA seq
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MAAPLQVIVSSDSGSQLWNSTVFDPHSGSSLLSYRGGNSAARSLCVLNGEYMLSAQLGKN
FINVWEIQRKDQLQQKLVCPGVVTCLTTSPDGLFLAAGVSEAVYLWEVSTGKLLSVLSRH
YQDVTCLKFTDDSSHFVSGAKDNLALVWSLCSVIQLDLNQTAEPRHILSRHSLPITDLHC
GLMGAQARVATASLDQTVKVYNTCPVLQVYNTCPVLQVYNTCPVLQVYNICPVYRYITPV
LGYRYITPVLGYRYITPVLCYRYITPEAESCLKSSE
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctctgcaggtgatagtgagcagtgactccggctctcagctgtggaacagc
accgtgtttgacccgcacagtgggtccagtctgctgtcctaccgaggcgggaacagcgcg
gcccggtccctctgcgtgctgaacggagagtacatgctgtctgctcagctggggaagaac
ttcatcaacgtgtgggagatccagaggaaggatcagctgcagcagaagctggtgtgtcca
ggtgtggtcacatgtctgactacatcacctgatggactcttcctggctgcaggtgtgtct
gaggctgtttacctgtgggaggtgtccacaggtaaactgctttccgtcctcagtcgtcac
tatcaggatgtcacctgtctgaagttcacagacgacagcagtcactttgtgtccggagca
aaagataacctggctctggtgtggagtctgtgcagtgtgatccagctggatttgaaccaa
accgctgagccacgtcacatcctgtctcgtcactctctaccaatcacagacctgcactgt
ggcctcatgggagctcaggccagagtcgccaccgcctccttagaccagactgtcaaggta
tataacacctgtcctgtgttacaggtatataacacctgtcctgtgttacaggtatataac
acctgtcctgtgttacaggtatataacatctgtcctgtatacaggtatataacacctgtc
ctgggttacaggtatataacacctgtcctgggttacaggtatataacacctgtcctgtgt
tacaggtatataacacctgaagctgaaagttgcttgaagagctcagagtga
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