| Entry |
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| Name |
(RefSeq) regulator of nonsense transcripts 1-like isoform X1
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| KO |
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
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| Pathway |
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| Brite |
Enzymes [BR:ssco01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133985313
5.6.2.5 RNA 5'-3' helicase
133985313
Messenger RNA biogenesis [BR:ssco03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
133985313
mRNA cycle factors
Common to processing body (P body) and stress granule
133985313
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
8:22043678..22061119
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| AA seq |
1102 aa
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEYDFTDFTLPSQTQTQGQTQSQLDGQVNG
PDEGLHNGGVDDSVAKASQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNT
SKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLCETVLECYNCGCRNVFLLGFIPA
KADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITA
QQINKLEELWKDNPTATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKK
LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGDMRLMQGDEICLRYKGDLAPLWKGIG
HVIKVPDNYGDEIAIELRSSVGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS
GYIYHKLLGHEVEDVTIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK
TVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSF
LALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRTLKRTAERELLMNADVICCTCV
GAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKA
GLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQ
WPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEG
QRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRR
LNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRK
LVNTINPGGRFMSTAMYDAREALIPGSAYDRSNAAGRPSNMYFQTHDQIGMIGAGPGHMA
AMNIPIPFNLVMPPMPPPSYLGQTNGPAAGRGAMKGKPGRGGRQRARGSANQGPSQGNGQ
SSQVSQDGASQSFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALS
QDSTYQGERAYQHGGVTGLSQY |
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| NT seq |
3309 nt +upstreamnt +downstreamnt
atgagtgtggaggcgtacgggccgagctcccagaccctcaccttcctggacaccgaggaa
gccgagctactcggagccgacactcagggctccgagtacgacttcactgacttcaccctc
ccgagccagacgcagactcaaggccagactcagagccaactggacggacaggtaaatggt
cctgatgagggacttcacaacggtggggtggacgactctgtggccaaagccagtcagctg
ttggccgagctcaattttgaggaggatgaagaagacacgtactacaccaaagatctgcct
gtgcacgcttgcagctactgtggtatccacgatccagcgtgtgtggtatactgcaatacc
agcaagaagtggttctgcaatggacgtggcaatacatctggcagccacattgttaaccac
ttggtgagggccaaatgcaaagaggtgacgctgcataaagatggaccgctgtgcgagaca
gtgctggagtgttacaactgtggctgccgcaatgtcttcctcctgggcttcatcccagcc
aaggctgattctgtggtggtacttctctgcaggcagccctgtgccagccagagtagcctg
aaggacatcaactgggacagctcccagtggcaaccactgatccaggaccgctgttttctg
tcctggctggtgaaaatcccatcagagcaggagcagctccgggcgcgtcagatcaccgcc
cagcagatcaacaagttggaggaactctggaaggacaaccccaccgccaccttagaagac
ctggagaaacccggcgtggacgaggaaccccagcatgtgctgctgcgctatgaggacgcc
taccagtaccaaaacatctttggcccattggtcaaactagaggctgactatgacaagaag
cttaaggagtcccagacccaagacaatataacagttaggtgggacctggggctgaataaa
aagaggattgcctatttcacactgcccaagacggattcaggtgatatgcggctgatgcag
ggtgatgagatctgcctgcggtacaagggagacctggccccactgtggaaaggcatcggc
catgtcatcaaagtccctgacaactatggagatgaaattgccattgagttgcgtagcagt
gttggagcacctgtggaaatcccccacaacttccaggtggactttgtgtggaagtccact
tcctttgacaggatgcagagcgccctgaagacctttgcagtggatgaaacatctgtgtct
ggctacatttaccacaaactgcttggtcatgaagtggaagatgtcaccataaagtgccag
ctgcccaagcgcttcaccgcccagggcctgcctgacctcaatcactcacaggtgtacgct
gtgaagacagtgctgcagaggcctctcagtctgatccagggtcctcctggcactgggaaa
actgttacttctgccactatcgtctaccacctgtcccgtcagggcaatgggccagttctg
gtgtgtgctcccagtaacatcgctgtggaccagttgactgagaagattgacaagactggt
ctgaaggtggtcaggctgtgtgctaagagcagggaggccattgagtcacctgtgtcgttc
ctggcgctgcacaaccagatcagtaacatggacagcatgccagagcttcagaaactacag
cagctgaaggatgagactggcgagctgtcgtctgccgatgagaagcgctacaggaccctg
aaacgcaccgctgagagggagctgctcatgaatgctgatgtgatctgctgtacctgcgtt
ggcgctggagaccctcgtctggccaagatgcagttccgctccatcctgattgatgagagc
acccaggccaccgagcctgagtgtatggtgcccgtggtgctgggagctaagcagctcatc
ctggtgggtgaccactgccagttgggtcctgtggtgatgtgtaagaaggcggccaaggca
ggtctgtctcagtccctgtttgaacgcctggtggttctgggcatccggccaatccgtctg
caggtccagtaccgtatgcacccagctctcagtgccttcccctccaacatcttctatgaa
ggctccctgcagaatggtgtcactgcagctgaccgcatcaagaagggctttgacttccag
tggccacagccagacaaacccatgttcttctatgtgactcaaggccaggaggagattgcc
agctctggaacctcctaccttaacaggacggaggctgcaaacgtagagaaaatcaccacc
aggctgctgaaagcgggagccaagcctgaccagattggcatcatcaccccgtacgagggt
cagcgctcctacctggtccagtacatgcagttcagcggctccctgcacaccaaactctat
cagcaggtggaaattgccagcgtggacgccttccagggcagagagaaggacttcatcatc
ctgtcttgtgttcgtgccaatgaacaccagggcatcggcttcttgaatgaccctcgtcgt
ctcaacgtggcgctgaccagagccaagtatggtgtgatcattgtggggaaccccaaggcc
ctgtccaagcagccgctgtggaacaacctgctcaacaactacaaggagcagaaggtcctc
gtggagggacccctcaataacctgagagagagcctcatgcagttcagcaaaccgcgcaag
ctggtcaacaccatcaaccctgggggccgttttatgagcactgcgatgtacgatgcccgt
gaggccctcatccctggttccgcctacgaccgcagcaatgctgcaggacgtccgtccaac
atgtactttcaaactcatgaccagattgggatgattggggcgggccccggtcacatggca
gctatgaatatccccatacccttcaacttggtgatgcccccaatgcctccgcccagctac
cttggccagaccaacggcccagctgcaggccgtggagcaatgaagggtaagcctgggcgc
ggtgggcgacagagggcccgcggctctgcaaaccagggtcccagtcagggtaacggacag
agcagccaagtcagccaggatggggcctcccagtccttctcacaggggccgctgactcag
ggctatatctccatgagccagccttctcagatgagccagcctggcctttcccagcccgag
ctatcccaggacagctacctgggcgatgagttcaagtcccaaatcgacgtggctttgtcc
caggactcgacttaccagggtgaacgtgcataccaacatggtggagtgactggcctgtca
cagtactag |
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