KEGG   Scomber scombrus (Atlantic mackerel): 133985339
Entry
133985339         CDS       T10651                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssco03009]
    133985339 (wdr18)
Ribosome biogenesis [BR:ssco03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    133985339 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_alt Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WDR55 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_DCAF12 Beta-prop_WDR75_2nd Ge1_WD40 Beta-prop_Nup120_160 KNTC1_N Beta-prop_IP5PC_F WDR54
Other DBs
NCBI-GeneID: 133985339
NCBI-ProteinID: XP_062280937
LinkDB
Position
8:32574905..32592002
AA seq 430 aa
MAAPLQVIVSSDSGSQLWNSTVFDPHSGSSLLSYRGGNSAARSLCVLNGEYMLSAQLGKN
FINVWEIQRKDQLQQKLVCPGVVTCLTTSPDGLFLAAGVSEAVYLWEVSTGKLLSVLSRH
YQDVTCLKFTDDSSHFVSGAKDNLALVWSLCSVIQLDLNQTAEPRHILSRHSLPITDLHC
GLMGAQARVATASLDQTVKMWELSSGEMLLSVLFDVEIMSVTFDPSEYFLFCGGSDGNIF
QVSLCSQSLSRDKSFQSDNDGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETVRLWDIQS
KQSIRCFAHKGPVTNAVIMAAPSNMFLPDSRPAVPLPRFSRHLHASEGDAGESGEVCVRL
GLYTQEEDETYLQKSDRLNSLMNAVTDKSVFGDGENTKVRVAELEEEVQTLKKVNKDLYD
FSSQLLTKPT
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggcggctcctctgcaggtgatagtgagcagtgactccggctctcagctgtggaacagc
accgtgtttgacccgcacagtgggtccagtctgctgtcctaccgaggcgggaacagcgcg
gcccggtccctctgcgtgctgaacggagagtacatgctgtctgctcagctggggaagaac
ttcatcaacgtgtgggagatccagaggaaggatcagctgcagcagaagctggtgtgtcca
ggtgtggtcacatgtctgactacatcacctgatggactcttcctggctgcaggtgtgtct
gaggctgtttacctgtgggaggtgtccacaggtaaactgctgtccgtcctcagtcgtcac
tatcaggatgtcacctgtctgaagttcacagacgacagcagccactttgtgtccggagca
aaagacaacctggctctggtgtggagtctgtgcagtgtgatccagctggatttgaaccaa
accgctgagccacgtcacatcctgtctcgtcactctctaccaatcacagacctgcactgt
ggcctcatgggagctcaggccagagtcgccaccgcctccttagaccagactgtcaagatg
tgggagctgtcctcaggtgagatgctcctgtctgtcctcttcgatgtggagatcatgtcc
gtgacctttgaccccagcgaatacttcctgttctgtggcggaagtgacggcaacatcttc
caagtgtctctgtgcagccagagtctcagccgggacaaatccttccagtccgacaacgac
gggaaccaggtgttcaaaggacacaggaacctggtgacctgcctgtcggtgtcgatggac
gggactctcctcctctccggttcccacgatgagacggttcgactttgggacatccagagc
aaacagagcatccgctgcttcgcccacaaaggtccggtgaccaacgcggtcatcatggcg
gctccgtctaacatgttcctgccggacagccggccggcggttcctctgccgcgcttcagc
cgacaccttcacgcctccgagggcgacgccggcgaatcaggagaggtgtgcgttcgcctc
ggactctacacacaggaggaagacgaaacgtacctgcagaaatctgatcggctgaactct
ctgatgaacgctgtgactgacaagtctgttttcggagacggtgagaacacgaaggtccga
gtcgccgagctcgaagaggaagttcaaactctgaagaaagtcaacaaagatctgtacgac
ttctccagtcagctgttaacgaaacccacatag

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