Scomber scombrus (Atlantic mackerel): 133985351
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Entry
133985351 CDS
T10651
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04810
Regulation of actin cytoskeleton
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
133985351 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133985351 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133985351 (cyfip1)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133985351 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
133985351 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
133985351
NCBI-ProteinID:
XP_062280953
LinkDB
All DBs
Position
8:complement(7741666..7770428)
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSVMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQGYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHTERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCVDYYENKMYLTPNEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSISSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDSEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFSQITLRDPLRQAIKKKKNVIQSVLQAIRKTICDWEAGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTIVDIERFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFRKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRTDCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIMELEGLLDINRLTHKLLSKFLTLDSLDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTILPFSQEFQRDKPPNAQPHYLYGSKTLNLAYSS
IYSSYRNFVGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLEDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIIALLGQQRRFDILDFSYHLLKVQKHDGKDEVIKSVP
LKKMVDRIRKFQVLNNEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccactgtgaccttagaggatgctttgtccaacgtggacctgctggaggaattg
ccgctcccggaccagcagccatgcatcgagcctctcccctcttcggtcatgtaccagccc
aacttcaacaccaacttcgaggaccgaaatgctttcgtcacaggcatcgccagatacatc
gagcaggccaccgtccactccagcatgaatgaaatgttggaggaggggcaggggtacgcc
atcatgctctacacctggaggagctgctcacgtgcaataccacaggtaaaatgcaacgaa
cagcccaacagagtagaaatctacgagaagacagtggaggtccttgagcctgaagtcacc
aagctgatgaatttcatgtacttccagcgcacagctatcgaccgtttctgcggggaggtc
cgtcgtctctgtcacaccgagcgcaggaaggactttgtctccgaagcctacctgctaacg
ctcggaaagttcatcaacatgttcgccgtgttggacgagctgaagaacatgaaatgcagt
gtcaagaatgaccactcagcctacaaacgtgctgctcagttcctcagaaaaatgtctgag
ccctcgtccattcaggagtctcagaacctgtccatgttcctcgcaaaccacaacaaaatc
actcagtctttgcagcagcagctggaagtgattaacggatacgaagagctgctggctgat
atcgtcaacctgtgcgtcgattactacgagaacaagatgtacctcacacccaatgagaaa
cacatgctgctcaaagtaatgggttttggcttgtacctcatggatgggaacagcagcaac
atctacaagctagatgccaagaagagaattaacctcaccaagattgacaagttttttaag
caactccaggtggttcctttgttcggtgacatgcagattgagttgtccaggtacatcaag
accagcgctcattttgaggagaacaaatccaggtggacttgcacgtctatatccagcagc
ccccagtacaacatctgtgagcagatgattcagatccgcgaggatcatatgcgcttcatc
tcggagctggctcgttatagcaacagtgaggtggtgactggatcggggcgacaggaagcc
caaaagacagattccgagtacaggaagctgtttgacttggccctgcagggtatgcagctg
ctctcccagtggagcgcacacgtcatggaagtgtactcctggaaactggttcatccgaca
gacaagtactcaaataaggagtgtcctgataatgccgaggaatatgaaagagccaccaga
tacaactacacaagcgaggagaagtttgccctcgtggaggtgatggcgatgataaaaggg
ctgcaggtgttgatgggacgcatggagagtgtgttcaatcacgccatccgtcacaccatc
tactcggctctgcaggacttctctcaaatcaccctgcgagacccgctgcggcaggccatc
aagaagaagaagaacgtcatccagagcgtcctccaggccatccgaaagacgatctgtgac
tgggaggcgggccgcgagccgcacaacgatcctgccctccgcggggaaaaagatcccaag
ggtggtttcgacatcaaggttcctcgtcgcgccgtggggccgtccagcacacagctctac
atggtgaggactatgctggagtctctcatcgctgataaaagtggctctaagaagactttg
cgcagcagtcttgaaggccccaccatcgtggacattgagaggtttcaccgcgagtccttc
ttttacacccatctgttaaacttcagcgaaaccttgcagcaatgttgtgacctctcccag
ctctggttcagggagttcttcctggagctcaccatgggccgcaggatccagttccccatt
gagatgtccatgccctggatcctcaccgaccacatcctagagaccaaggaagcttccatg
atggagtacgtgctgtatcctctggatttatataatgacagtgcacactacgccctgacc
aagttcaggaagcagttcctctatgatgaaatagaagctgaggtgaacttgtgctttgat
cagtttgtctacaagctggctgatcaaatatttgcctactacaagattctagcaggaagt
cttctgcttgacaaacgtctgagaaccgactgcaagaaccaaggagccaacattccctgg
ccggcctccaaccgctatgagactctactgaagcagagacatgtccagcttctaggccgc
tccattgatctgaacagactcatcactcagagggtttcagctgccctttacaagtctcta
gagctggccatcaatcgctttgagagtgaggacctcacttcaattatggaactagaaggt
ctcttagacatcaacagattgacgcacaagctactcagtaagttcttgaccctggacagc
ttagacgccatgttccgcgaggccaaccacaacgtgtcagccccgtatggacggataaca
ctgcacgtcttctgggaactcaactatgatttcttgcccaactattgctacaacggctcc
accaacaggtttgtgcgcaccatcctgcccttctctcaggagttccagagagacaagccg
cccaatgctcaaccccattatctgtacgggtcaaagaccttgaacctggcgtacagcagc
atatatagctcgtacagaaacttcgtgggccccccgcacataaaggtcatgtgcaggctt
ctgggttaccagggcatcgccgtggtgatggaggaactgctgaaggtcgtcaaaagcctg
cttcagggaactataatgcagtatgtgaagaccctgatggaggtgatgcccaagatctgc
cgacttccccgccacgaatacggctccccaggtatcttggagttcttccaccaccagctg
aaggacattgtcgagtacgccgagctcaagacggtgtgtttccagaacctgagggaagtt
ggaaacgccctcctcttctgtctgctgagcgagcagagtctgtcacaggaagaagtttgt
gatttgctgcatgccgcacccttccagaacattcttcccagagttcatgtcaaagagggg
gagcgccttgatgccaagatgaagcgcttggaagccaaatacacagcgttgcatctggtt
ccactgattgagcgcctgggcactccacagcaaatcgccatcgctcgtgagggagacctc
ctaaccaaagagaggctgtgctgcggtttgtccatgttcgaggtcatcctcacacgtgtg
cgcggcttcctcgaggaccccatctggcgcggccctcttcccagcaacggcgtgatgcac
gtcgatgagtgcgtggagttccaccgtctctggagcgccatgcagtttgtgtactgcatc
ccagtaggagcccacgagttcacagtggagcaatgcttcggagacggcctccactgggcg
ggctgtatgatcatcgctctcctgggacagcagaggcgcttcgacatcctcgacttcagc
taccaccttctcaaagtgcagaagcacgacggcaaggacgaggtcatcaagagcgtgcca
ctgaagaagatggttgacagaatccgcaaattccaagtcctcaacaatgagattttcgcc
atcctgaacaagtacctgaagtctggagacggagagaacatgccggtggaacacgtccga
tgcttccagccaccgatacaccagtcgctcgccagcagctga
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