Scomber scombrus (Atlantic mackerel): 133985454
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Entry
133985454 CDS
T10651
Symbol
ppid
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase D
KO
K05864
peptidyl-prolyl isomerase D [EC:
5.2.1.8
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04217
Necroptosis
ssco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133985454 (ppid)
04218 Cellular senescence
133985454 (ppid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssco03110
]
133985454 (ppid)
Enzymes [BR:
ssco01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
133985454 (ppid)
Chaperones and folding catalysts [BR:
ssco03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
133985454 (ppid)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
TPR_1
TPR_2
TPR_11
TPR_BSK1_C
TPR_19
Seryl_tRNA_N
DUF2753
DUF627
MIT
DUF3856
Motif
Other DBs
NCBI-GeneID:
133985454
NCBI-ProteinID:
XP_062281057
LinkDB
All DBs
Position
9:7821049..7830468
Genome browser
AA seq
370 aa
AA seq
DB search
MSHPTPSAKPSNSENPRVFFDVDIGGGRAGRIVMELFADITPKTAENFRALCTGEKGTGT
STGKPLHFKGCPFHRIIKKFMIQGGDFSNHNGTGGESIYGEKFEDENFHYKHDKMGLLSM
ANAGPNTNGSQFFITTVPTPHLDDKHVVFGQVLKGMGIVKMLESIDTTEDAPVQPCVIGD
CGEHKEGDNWGVGPSDGSGDAHPDFPEDSDIDFKDVDKVLSVAEDVKNIGNNLFKNQDWK
TAVQKYSKALRYLEMSGDHVEEEVQKKLEPTAISCFLNTAACNLKMQMWQGAVESCNEAL
ELDQANTKALFRRAQAWQGLKEYSQAMTDLKKAQGVAPEDKAIINEMKRVQLKVQEEKEK
EKKIYAKMFA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacccaacaccgtctgccaagccttcaaactctgaaaaccctcgtgtcttcttt
gatgtagacattggtgggggaagagctggccgaatagttatggagctgtttgctgatatc
acccccaagactgctgaaaatttccgggccctctgcactggagagaaaggcactggcaca
tcgactgggaaacctctgcacttcaaaggatgcccgttccacagaattatcaagaagttc
atgatccagggaggcgacttctccaaccataatggcaccgggggtgagagcatctacggc
gagaagtttgaggatgaaaacttccactacaagcatgacaaaatgggtctgctaagtatg
gccaacgctgggccgaacaccaacggctcacagttcttcatcactacggttcccacaccg
cacttagatgacaaacacgtggtctttggacaagtgttgaaggggatgggcatagtgaaa
atgttggagtccattgatactacagaggacgctcctgtacagccgtgtgtcattggagac
tgcggcgagcataaggagggggacaactggggtgttgggccaagcgatgggtcaggagac
gcccacccagacttcccagaggactctgatatcgactttaaagatgttgacaaagttctg
tctgttgctgaggatgtgaagaatattgggaacaacctctttaagaatcaagactggaaa
accgctgtccaaaaatacagcaaagccctcaggtatttggagatgagtggagatcacgtg
gaggaggaagtgcagaagaagctggagcccaccgccatcagctgcttcctcaacacagca
gcgtgcaatctgaagatgcagatgtggcagggagctgtggaaagctgcaacgaggctctg
gagctggaccaagccaacaccaaggcccttttccgcagggcccaggcttggcaggggtta
aaggaatacagccaagccatgactgacctgaagaaagctcagggagtagctccagaagat
aaagctatcatcaacgagatgaagagagtccagcttaaagtccaggaggagaaggagaaa
gagaagaagatctatgctaaaatgtttgcttga
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integrated database retrieval system
