Scomber scombrus (Atlantic mackerel): 133985459
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Entry
133985459 CDS
T10651
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133985459
04082 Neuroactive ligand signaling
133985459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133985459
Ion channels [BR:
ssco04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
133985459
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Pyr4-TMTC
MJ1145
Red1
Motif
Other DBs
NCBI-GeneID:
133985459
NCBI-ProteinID:
XP_062281076
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Position
9:15318636..15332695
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AA seq
565 aa
AA seq
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MIFPGKLTNVLLLVLLTAQGCFSSKAEDRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLVKVDEVNQIMETNLWLRHVWNDYKLKWTPVEYDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPEWVRAVFLGVLPRVMLMRRPIDQGCSSSA
SITGGTGGPGGGSSGGNKKRKNSLGGGSGTGSVSVGGITGGVPCPALDGGTGGGGASSAG
GSMNCVEYGEMNRDMNRDMNRRCPYRGKEVPTPVPPPIVPPPPQAPQTQGPQESELPKVP
RPLSAPSPVNAVVAFSVVSPEIKQAIESVKYIAENMRTRNKAKEVEDDWKYVAMVIDRIF
LWVFVTVCVLGTLGLFLQPVINFLK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgattttccccgggaaactaacaaacgtcctcctgctggtgctcctgacagcgcaaggc
tgtttttcatctaaggcagaggacagattatttcggaggttgttccgcaggtacaaccag
ttcatccgaccagtggagaatgtatctgatccagtcacagtggaattcgaggtgtccata
tctcaactagtcaaagtggatgaggtcaatcaaattatggaaaccaatctgtggctgaga
catgtctggaatgactataaactgaaatggactcctgttgagtacgatggcattgagttc
atacgagttccatctaataagatttggaggccagacattgttttgtacaacaatgctgta
ggtgatttcttagtggaagacaagaccaaggctctgttgaagtttgatggcaccatcacc
tgggttcctccagctatttttaaatcctcctgcccgatggacatcacctatttccccttt
gactaccagaactgctccatgaagtttggctcctggacctatgacaaggccaagattgac
ctggtgctcattggctcaaaggtgaacctgaaagacttctgggaaagtggagagtgggag
ataattgatgcaccaggttacaagcacgacatcaaatataactgctgtgaggagatctac
ccggacatcacctactccttctacatccgtcgcctgccactcttctacaccattaacctc
atcatcccctgcctcctcatctccttcctcacagtgttggtcttctatcttccatctgac
tgtggggagaaggtcactctgtgtatctctgtcctcctctccctcactgtgttcctgctg
gtcatcaccgagactatcccttcaacgtcacttgtcatccctctgattggcgagtacctc
ctctttaccatgatttttgtcacgctcagtattgtcatcactgtctttgtgctgaatgtc
cactaccgcacccccatgactcacacaatgccagagtgggtgagggcggtgttccttggg
gtgctacccagggtgatgttgatgaggcggcctatcgaccagggctgttcctcttctgcc
agtatcacaggaggcacaggaggaccaggaggagggagcagtggagggaacaagaagaga
aagaacagtctgggaggaggaagtggaactggaagcgtaagcgttggaggtatcactggg
ggtgtaccgtgtccagcgctagatggtggcacagggggaggaggagcctcctcagctggt
ggctccatgaactgtgtggagtatggtgaaatgaaccgtgacatgaaccgggatatgaac
agaaggtgcccctacagaggcaaagaggtaccgactcctgtccctcccccaattgtgccc
cctcctccccaggcaccccagacccaggggccacaggagtcagagttgcccaaagtacca
aggcccctaagtgccccatcaccggtgaatgctgtggttgccttctccgtggtgtcacca
gagatcaaacaggccatcgagagcgtgaagtatatcgctgagaacatgaggactcgcaac
aaagccaaagaggtggaggatgactggaagtacgtcgccatggtcatagataggatcttc
ctatgggtttttgtgacagtgtgtgtgctgggaactctgggactcttccttcagccagtc
atcaacttcttaaaatga
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