Scomber scombrus (Atlantic mackerel): 133985470
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Entry
133985470 CDS
T10651
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03015
mRNA surveillance pathway
ssco04261
Adrenergic signaling in cardiomyocytes
ssco04382
Cornified envelope formation
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133985470
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133985470
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
133985470
09158 Development and regeneration
04382 Cornified envelope formation
133985470
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133985470
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133985470
03036 Chromosome and associated proteins [BR:
ssco03036
]
133985470
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133985470
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133985470
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133985470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
WD40_Gbeta
Y_phosphatase2
DSE1_N
Motif
Other DBs
NCBI-GeneID:
133985470
NCBI-ProteinID:
XP_062281089
LinkDB
All DBs
Position
9:16727799..16746111
Genome browser
AA seq
456 aa
AA seq
DB search
MGEDTDATPTLNHRGFLPDHNYVTEADIISTVEFNHTGELLATGDKGGRVVIFQREPEVD
SHSCSKFEPFSQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTND
KTIKLWKVSERDKRPEGYNLKDEEGRIKDISTVTSLQVPVLKPMDLMVEVSPRRVFANAH
TYHVNSISVNSDYETYMSADDLRINLWHLDITDRSFNIVDIKPTNMEDLTEVITAAEFHP
HHCNLFVYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSARSFFSEIISSVSDVKFSHS
GRYLLTRDYLTAKVWDLNMESKPLETYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSV
IMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCAAGGKRRKDDISVDSLDF
TKKILHTAWHPTENIIAIAATNNLYIFQDKLNSEMH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagacactgacgccaccccgacgctcaaccaccgcggcttcctccccgaccac
aactatgtgactgaagctgatatcatctccactgttgagttcaaccacacaggagagctc
ctggccacaggggacaagggaggccgagtggtcatctttcagagggaacctgaggtagac
tcacactcatgctccaagtttgagccattctcccagggtgaatacaatgtctacagcact
ttccagagccatgagcccgagttcgactatctcaagagtctggagatcgaggagaagatc
aataagatccgatggctgcctcagcagaacgctgcacacttcctcctctccaccaatgat
aagaccattaagttgtggaaggtgagtgaaagagacaaaaggccggagggatacaacctg
aaggatgaggagggtcgcatcaaggacatctccactgtcacctccctacaggtgccggtg
ttgaagccgatggacttgatggtggaggtgagcccgcggcgagtttttgccaacgcccac
acctaccacgtcaactccatctccgtcaactccgactacgagacctacatgtcagctgac
gacctgaggatcaacctctggcatctggacattaccgaccgcagcttcaacattgtggac
atcaaaccaaccaacatggaggatctgacagaagtgatcacagcggctgagtttcacccc
catcattgtaacttgtttgtctatagcagcagcaaaggcaccctgcgcctctgtgacatg
cgagaagcagcgctgtgtgacaaacactccaaattgtttgaggagcccgaggaccccagc
gctcgctccttcttctctgagattatctcttcggtgtcggacgtcaagtttagccacagc
ggtcgctacctgctcaccagagactacctgactgccaaagtctgggacctcaacatggag
agcaagcccctggagacataccaggttcatgattacctccgcagcaagttgtgctccctt
tacgaaaacgactgcatctttgacaagtttgagtgtgcctggaacggctcggacagtgtg
atcatgaccggagcctacaacaacttcttccgcatgtttgaccggaacaccaaacgcgac
gtgaccctggaagcgtccagagagagcagtaaaccccgagctgtcctcaagccgcggagg
gtctgtgccgccggaggaaagcgccggaaggacgacatcagcgtggacagcttggacttc
actaagaagatcctccacacagcctggcacccgacggagaacatcattgccattgccgcc
accaacaacctgtacatcttccaagacaaactcaactctgagatgcattaa
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