Scomber scombrus (Atlantic mackerel): 133985647
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Entry
133985647 CDS
T10651
Name
(RefSeq) cyclic nucleotide-gated cation channel-like
KO
K04949
cyclic nucleotide gated channel alpha 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133985647
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133985647
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Baculo_PEP_C
Ion_trans_2
CaMBD
ABC_tran_CTD
SlyX
YjcZ
WHD_YfjI_C
ADIP
XhlA
HAUS-augmin3
Prefoldin_2
FapA
CLIP1
Perilipin
Motif
Other DBs
NCBI-GeneID:
133985647
NCBI-ProteinID:
XP_062281284
LinkDB
All DBs
Position
9:complement(26338545..26344393)
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AA seq
679 aa
AA seq
DB search
MTGPLQDAHRLSVKTWTEEESDRADSTLSRGQSMCDDTSSELQRMAAIDRRDINSQNSFR
GRGALSRIVSMVMTLREWAQKSLAEETERPDSFLERFRGPANMDVQAPPSRFSHSHTGSE
TDNEVRRTRRTRRKCNILVLSPSDDAYYHWLMVIGPAVFYNWTMLVVRACFDELQMKSML
VWLVLDYVCDGVYILDIAVRLHTGFLDQGLMVKDVQRLRETYVRTRQCKLDICSILPTDL
LYLTVGTSYTPLLRFNRLLRLPRLFEFFERTETRTGYPNAFRICKLVLYILVIIHWNACG
YYSFSKVLGLGSDSWVYPNASDPEFGSLTRSYIYCLYWSTLTLTTIGETPPPVRDEEYLF
LIFDFLVGVLIFASIVGNVGAMISNMNATRATFQTRVDSLKHYMHFRHVSKVLEQRVIRW
FDYLWTNQKTIDEQEVLRSLPNKLRAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRP
QVFSPGDYICRKGDVGKEMYIIKDGRLAVVGEDGVTQLAVLTGGSCFGEISILNISGSKM
GNRRTANIRSLGYSDLFCLSKQDLMEALQEFPHARAQLEQRGRDILQKEGLLEEVNVSAG
EELEEKVERLETSLDRLQTCLARLQSEFNSSQQRLKQRITALEHNITTVVTGSGFLSDAD
GNESVSGGDGVRSEINIRF
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtcctttgcaggatgcgcacaggctgtctgtgaaaacatggacagaggaggag
agtgaccgagctgacagcacacttagcagaggacaatcgatgtgtgatgacacttcttca
gagctacagagaatggctgccattgacagaagggatattaactcccagaattcctttcgt
gggcgaggtgctctgtccaggattgtaagcatggtgatgactctgagagaatgggctcag
aagagtttggctgaagagacggagcggcccgattcctttttggaacgattcagaggccca
gccaacatggacgtacaggccccaccaagcaggtttagccacagccacactggctctgaa
acagataatgaagtcagacgcactagacgcacgaggaggaagtgtaatatccttgtgtta
tcaccatctgatgatgcgtactaccactggctgatggtgattggtcccgcagttttttat
aactggaccatgctggtcgtcagggcctgttttgatgagctccagatgaagagcatgttg
gtgtggctggtgctggactatgtctgtgatggagtctacatcctggatatagctgttcgt
ctccacacaggtttcttggaccagggcttgatggtgaaagatgtgcagcgtctgagagaa
acctatgttcgaacccgacagtgtaaacttgacatctgctccatccttccaactgatctg
ctgtacctgactgttggaaccagctacactcctcttcttcgattcaaccgactgctacgc
ctgccacgtctgtttgagttctttgaacgtaccgaaacacgaacgggctaccccaatgct
ttccgcatctgtaaactggtactgtacatcctggtgatcatccactggaatgcctgtggg
tactatagcttctccaaagtcttgggactgggctcggattcttgggtttatccaaatgct
tcagacccagagttcggctccctgaccagaagttacatatactgcctgtactggtccacc
ctgacactgactaccattggagagacaccacctcctgttagagatgaagagtatctgttc
ctgatatttgactttctggttggagttctgatttttgcctccattgtgggcaatgttgga
gccatgatttccaatatgaatgccacaagagccacctttcagacccgtgtagattcactg
aaacactacatgcacttcagacatgtgagcaaggtgcttgagcagcgcgtcattcgctgg
tttgactatctttggaccaatcagaagacaatagatgaacaggaagtgctaaggagcctg
cccaataaactgagagcagagattgctattaatgttcacctggacacactgaagaaggtt
cgtatttttcaggactgtgaggcaggcctcctggtagagttggtgctaaaacttcgacca
caggtcttcagtcctggagactacatctgtagaaagggagatgtgggtaaggagatgtat
ataattaaagatggccgtctggcagtggtcggggaggacggagtcacccagttagctgtt
ctgacaggaggaagttgctttggagaaatcagcatcctaaacattagcggcagcaagatg
gggaaccggcgcacagctaatattcgcagtctgggatactcagatctcttctgcctctcc
aaacaagacctgatggaggcacttcaggagttcccccacgccagggcccagctggagcag
agggggcgagacatcctgcagaaagaggggcttctagaggaagtcaatgtgtctgcagga
gaggagcttgaggagaaggtggaaaggttggaaaccagtctggatcgactacagacttgt
ttggctcgtctccaaagtgagttcaactcttcccagcaacgactgaaacagcgaatcaca
gccctcgaacacaacatcaccacagtggtcacaggcagtggttttctctcagacgctgac
ggcaatgagagtgtctctggtggtgatggcgtgcgcagtgaaatcaatatccggttctga
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