Scomber scombrus (Atlantic mackerel): 133985662
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Entry
133985662 CDS
T10651
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133985662 (sox3)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133985662 (sox3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133985662
NCBI-ProteinID:
XP_062281300
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Position
9:complement(13924068..13924970)
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AA seq
300 aa
AA seq
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MYNMMETEIKTPLPQSNSGSAQGAKNNSVSDQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHSMNSPQIQQM
HRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTTSAMGLSSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagattaagaccccgctcccgcagtccaactcgggctcg
gcgcagggcgcaaagaacaacagtgtcagcgaccaggagcgggtgaagaggccgatgaac
gccttcatggtctggtctcggggacagcggaggaagatggctcaagaaaatcccaaaatg
cacaactctgaaatcagcaagcgacttggtgcagactggaaacttctgaccgacgcagaa
aagagaccattcatcgacgaggccaagcgtctgcgcgctatgcacatgaaggagcatccg
gattataaataccgtccccgcaggaagaccaagaccttgctcaagaaagacaagtattct
ttgcccgggggactgttggcgccaggagccaatgccgtcaacaactctgtgtcggtggga
cagaggatggacggttatgcgcacatgaatgggtggacaaacagtgcgtactccctcatg
caggaccagttggcctaccctcagcatcacagcatgaacagcccccagattcagcagatg
caccgatacgagatggcaggtctccagtacccgatgatgtcctcggcacagacctacatg
aacgcggcttccacgtatagcatgtctccagcgtacacgcagcagaccaccagcgccatg
ggactgagctccatggcgtccgtgtgcaagaccgagcccagctcaccgccgccggccatc
acgtcccactctcaaagggcttgtttgggggacctgagggatatgataagcatgtacctg
cctcccggtggggacagcgcagagcattcctccctgcagagcagccggttacacagtgtc
catccgcactatcagaccgcagggactggcgtcaatgggacactacctctcacccacatc
tga
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