Scomber scombrus (Atlantic mackerel): 133985671
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Entry
133985671 CDS
T10651
Symbol
ctnna1
Name
(RefSeq) catenin alpha-1
KO
K05691
catenin alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04520
Adherens junction
ssco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133985671 (ctnna1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133985671 (ctnna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133985671 (ctnna1)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133985671 (ctnna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
HTH_psq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
133985671
NCBI-ProteinID:
XP_062281315
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Position
9:21721418..21799237
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AA seq
907 aa
AA seq
DB search
MTTINTANINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHV
LAASVETATQNFLEKGEKIAKESQFLKDELTAAVEDVRKQGDSMRQASGEFAEDPCSSVK
RGNMVRAARALLSAVTHLLVLADMSDVYKLLLQLKLVEDSLVKVRNAGTEQELGIQYKAL
KPEVDKLNIMAAKRQQELKDVHHKDQMAAARGVLQRNIPMLYTASRACLQHPDVAAYKAN
RDLIYKQLQHAVSGISNAAQATSTEDSALNQPGGGGELAYALNNFDKQIIVDPLAFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNAGRKDR
SDALNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHANKLIEVANLACSISNNEEGVKLVRMAASQLETLCPQVINAALALAAKPNSKVA
QDNMDLFKEQWEKQVRVLTDAVDDITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVVHVVTSEMDNYEPGVYTEKVLEATKLLTNTVMPRFTEQVESAVEALSA
NPSLPVDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTED
DQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMC
MIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADNCPDSTCKQDLLAYL
QRIALYCHQLNICSKVKAEVQNLGGELVVSGLDSAMSLIQAAKNLMNTVVSTVKASYVAS
TKYQKNKGMEALNMPAISWRMKAPEKKPLVKREKQDDGQTNRVKRSSHKKHINPVQALSE
FKAMDSI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatcaacacagctaacatcaactttaaatgggacccaaagagcctagagatc
cgtactctggcagtggagaggctgctggagcccctggtcacccaggttaccactttggta
aactccagcaacaaaggcccatcgaacaagaagaagggacgctccaagaaggctcatgtg
ctggcagcctcagtggagacagcgacccagaacttcctcgagaaaggagaaaagattgca
aaggaaagtcagttcctcaaggatgaactgactgcagcagtggaagatgtccgcaagcaa
ggtgactcaatgaggcaggcttctggagaatttgcagaagacccctgctcctctgtgaag
aggggcaatatggttcgtgctgccagagccctcctgtcggcagtcacacatctgttggtg
ctggcagacatgtctgatgtctacaaacttctactgcagcttaaactggttgaggatagt
ctggtgaaagtccgtaatgcaggaacagagcaggaactggggatccaatataaggccttg
aaaccagaggtggacaagctgaacatcatggctgccaagagacagcaggagcttaaggac
gtccaccacaaggatcaaatggctgctgctcgtggcgtcctacagaggaacatccccatg
ctgtacacagcgtctcgtgcctgcctgcagcaccctgatgtggcagcctacaaggcgaac
cgtgacctgatctacaagcagctgcagcatgcagtttcaggcatctccaatgcggcccag
gctacctccactgaagactcagcactcaatcagccaggaggaggtggagagctcgcctac
gccctcaacaattttgataaacaaatcattgtggaccccctggcgtttagtgaggagcgc
ttccgtccctccctggaggagcgccttgagagcattatcagtggtgctgccctcatggcc
gactcttcctgcacacgtgatgaccgcagggagcgcatcgtggccgaatgcaattctgtg
cgccaggctcttcaggacctactgtccgagtacatgggcaatgctggaaggaaagacagg
agtgatgctctgaacacagccatcgacaggatgacaaagaagaccagagaccttcgcaga
cagctgcgtaaggctgtaatggaccatgtctccgactccttcctggagaccaacgtcccc
ctcctggtcctgatcgaagctgccaagaacggcaacgagaaagaagtcaaggaatacgcg
caggtgttccgtgagcacgccaacaagctgatagaggtggccaacctggcgtgctccatc
tctaacaacgaggagggagtgaagctggtccggatggcagcatctcaactggaaactctt
tgcccccaggtgattaatgcagcgttggcccttgctgccaagcccaacagtaaggtggcc
caggacaatatggatttgttcaaggagcagtgggagaagcaggtccgcgtcctcactgat
gccgttgatgacataacatccattgacgacttcctttgtgtgtctgagaaccacatccta
gaggatgtgaataagtgtgtcatcgctctgcaggagaaagatgttgatggtttggatcgc
actgctggggctattcgaggtcgtgctgccagagtcgtccacgtggtgacttctgaaatg
gacaattatgaacctggagtctacacagagaaggtcttggaggccaccaagctgctcact
aacacagtcatgccacggttcacggagcaagtggagtctgcagtggaggccttgagcgca
aacccctcactacctgtggatgaaaacgagttcatcgatgcttcccgtctggtatatgac
ggcattcgcgacattcgcaaggctgtcctcatgatcagaactccagaggagttggatgac
tctgactttgagactgaggactttgatgttcgcagcaggaccagcgtgcagacagaggat
gaccagctcattgctggccagagtgctcgggctatcatggcccagttgccccaggagcag
aaggcgaagattgcagaacaggtggccagcttccaggaggagaagagcaagctggatgct
gaggtatccaagtgggacgacagtggcaatgatatcatcgtgttggccaagcagatgtgc
atgatcatgatggagatgacagacttcaccagggggaaagggccgctgaagaacacatct
gatgtcatcagcgccgccaagaaaattgcagaggcaggatcaagaatggacaagctgggt
cgcaccatcgctgacaattgccccgactctacctgcaagcaggacctgctcgcctacctg
cagcgtattgccttgtactgccaccagctcaacatctgcagcaaagtcaaggctgaggtt
cagaatctgggaggagagctggttgtctcggggctggacagcgccatgtccctgattcag
gctgccaagaacctgatgaacacagtggtgtccacagtgaaggcctcctatgttgcgtct
actaagtaccagaagaacaaaggcatggaggcccttaatatgcctgctatttcatggagg
atgaaggcccccgagaagaagcctctggtgaagagagagaagcaggatgacggtcaaacc
aacagagtcaagaggtcctctcacaagaagcacatcaaccctgtgcaggctctgagcgag
tttaaagccatggatagcatctag
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