Scomber scombrus (Atlantic mackerel): 133985698
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Entry
133985698 CDS
T10651
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04114
Oocyte meiosis
ssco04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
133985698
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
133985698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133985698
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133985698
Factors involved in mRNA localization
Trans-acting binding proteins
133985698
mRNA cycle factors
P-body specific factors
133985698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
133985698
NCBI-ProteinID:
XP_062281348
LinkDB
All DBs
Position
9:complement(22145960..22157026)
Genome browser
AA seq
747 aa
AA seq
DB search
MGDYGFGVLVKNSSGNKSAFPVRIPPHLQPQHPHHPSNPPSPPSFVNNTCSTNGGSAWLF
PAVAQHSNMQDDILESDKSKALDLQDMQEKSQVQVQPQALSPGQQEAGGGLGELEGALPE
EGSLEKGSLESSGGKDKLRMESPVLSGFDYQDSLGMGTSCAQSTSSSSSLTSFNNWSPAV
PSTQSPVVGDDIGGFFGPAGSNANGPPLLFQNFSHHAGPGFGGGGSFSPQIGPVSQHHPP
TPHPQHYHPHGQGVPQQHRRSPASPHPPQPSFPPHAHRTGGFPQLPHLAPAQSKPPSPWG
SYQSPSTPTSTSWSPGGYGGWGGTQGVREYRRGVGGGMTGLNSISPLKKSFPNNQVPSQK
FPRNSSGFNHKGWVEDSMSRCDSVYPFQQERTRSFDGFSMHSLENSLIDIMRAEQDSLKG
RYSFSHQGGDGPLPMNARSYGRRRGHSSLFPMEDERSFGEDESGDQGLAGLGSAHCFPHL
NGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLF
QDESSVQALIDACIQEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKTI
FVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISAR
FVQLQHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIH
SRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgggggactacgggtttggagttctggtgaagaacagcagcggtaacaagtctgctttc
cctgtaaggatccctcctcacctccaaccccagcaccctcaccacccctccaaccccccc
agccccccctcctttgtaaacaacacctgctccaccaatgggggcagtgcttggctgttc
cctgccgtagcccaacacagtaacatgcaagatgacattctggagtcagacaagtccaag
gccttggacctccaggacatgcaagagaagtctcaggtccaggtccagcctcaggccctc
tctccaggccagcaagaggcaggcggaggcctaggggagctcgagggagctctgccagaa
gaaggttcattggagaagggttctttggagagcagtggtgggaaggataagctcaggatg
gagtccccggtgctaagcgggtttgactaccaggacagcctgggaatgggtacaagctgt
gcacagtccacctcctcctcctcctcgctgaccagtttcaacaactggtcacctgctgta
ccatccacccagtctccagtggtcggagacgatattggaggattcttcggccctgctggc
tccaatgccaatggacctcccttgctgttccagaacttctcccaccatgctggacctggc
tttggaggcggaggtagcttctccccgcagattggaccagtctcccagcaccaccctccc
acacctcacccccaacactatcatcctcatggccagggggtcccacagcagcaccggcgc
tctccagctagccctcacccacctcagccctccttccctcctcatgcccatcgcactgga
ggattcccccagctgccccaccttgctcctgctcagagcaaacccccttcaccttgggga
agctaccagagcccctccacacccacatccacctcctggagccctggaggttacggtggc
tggggaggcacgcagggggttcgagagtacaggcggggggtaggcggaggcatgacaggc
ctgaactcaatctccccactgaagaaatctttccccaacaaccaggttccctcccagaag
tttcccagaaatagctctggcttcaatcataaaggctgggtggaagacagcatgagccgc
tgtgatagtgtctaccctttccagcaggagagaacacggtcctttgatggtttcagtatg
cactctctggagaactctctgattgacattatgagggctgagcaggattccttgaaagga
cgctacagcttctcccaccagggtggagacggacctctacctatgaatgcaagaagttat
ggcagaagacgaggtcattcctctctgtttcccatggaggatgagcgctcttttggagag
gacgaatcaggtgaccaggggcttgctggccttggttcagcccactgtttccctcatctc
aatggtgaacgcgtggagcgatattctcgcaaagtgtttgttggtgggctgcccccagat
atagatgaagatgaaatcactgccagtttccgtcgtttcggtcacttgtttgtggactgg
cctcacaaggcagagagcaagtcctattttccaccaaaaggatatgctttcctgctgttt
caagatgagagctctgttcaggctctgattgatgcttgtattcaagaagatggcaagctt
tacctgtgtgtctccagccccaccatcaaagacaagcctgtccagatccgaccctggaac
ctaaatgacagtgactttgttatggacgggtctcagccgttggacccaagaaagaccatc
tttgtaggaggtgtccctcgtccccttcgtgcagtggagcttgccatgatcatggaccgt
ctgtatgggggagtgtgttacgctgggattgacacagaccctgagctcaagtatccaaaa
ggggcggggcgagtggccttctccaatcagcaaagctacattgcagccattagtgcccga
tttgttcaactgcagcacggggagattgataaacgggtggaagtgaagccatatgttctg
gacgaccagctgtgtgatgagtgtcagggcacccgctgtggggggaagtttgctcctttc
ttctgcgccaacgtgacctgtctgcaatactactgtgagtactgctgggcagccatccac
tcccgggctggtcgtgagttccataagccactggtgaaggagggcggggaccgaccacga
cacatctccttccgctggaactaa
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