Scomber scombrus (Atlantic mackerel): 133985712
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Entry
133985712 CDS
T10651
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04115
p53 signaling pathway
ssco04140
Autophagy - animal
ssco04150
mTOR signaling pathway
ssco04218
Cellular senescence
ssco04910
Insulin signaling pathway
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
133985712 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133985712 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
133985712 (tsc2)
04218 Cellular senescence
133985712 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
133985712 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133985712 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133985712 (tsc2)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133985712 (tsc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
133985712
NCBI-ProteinID:
XP_062281373
LinkDB
All DBs
Position
2:10436579..10461586
Genome browser
AA seq
1931 aa
AA seq
DB search
MNKQPSKESLKDKVKGIFGLGPPRPPSKQTDAKPSEFIITTDIIKELHPDCGLSNRVRMM
NHVCDLAKTKKFEEHAVEAVWKAVEDMLTPEQPPEARHTVLQLLRAIIQGQVGTQTHTHT
HTHTHTHTHTHTHTHTVKQIQNACTAPLISILTVYVKGERLGPLRAYFFKVIRDYQPCNE
DLSDRLEVFKALTENGKDITYLEEDIARFVLLWMDIGLTSDFLHVLVNLVKFNSCYLDQN
VSIMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSDSLTVFIITLCRTVNVKEFCE
SCWKLMRKVLGTHLGHSAIYTMCRIMEERVYMEDAPLLRGAVFFVGMALWGAHRLPALKN
TPTLVLPSFYKAMSCANEVVSYEIVLSITRLIKKYGKELQVVTWDILLGIIERLLQQIQT
IGSAELKAIVYELLTTVEELYEQNDYHGSTEKFFSLVEKCADKRPDASVLTLISYRAQSI
QPAKDGWIQSLYRLMEKFFRNETRSVIRIKVLHILSFVLSTNRQLYEDELIEMVVIPQLS
GIAEDRDLAVRKQATQLLVDLAEGCNTHHFTSLLDIIERVASRSLVCSGPLEVSERDPTA
ESPMEDVRTAILGLLEILQSKLYSLPASHASRVYELLISHLQLHYKNKYCSAISSGIRLQ
VFDFFLMMRADSLHRLGVPNKDGAMRFSPYCYCDTGEPEKRVSEKKPTGSTSPPAGSPAP
PAAPPPSTRSAYLPYSPAFSVLLQCLKMETDWKVLKLVLDKLPWTLQYKVLLLTSPCSLD
QLCSTLCCMVTDRLISERLKKTPEGFSRTDVQLAVVPVLTAITSYHNYLEQSRQRELVQC
LETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVKLTHISATVAMASPMLEFLSTLV
RLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIAMWFIRCRLPFRKDFVQY
ITKGLRSNALLPFDDGHEQSSFRARSTSLNERPKSLRAAKVAKAAAAVANSSSSPVKELR
DLSAMDAFRSRSISVSEHAVRRMHTSTTTCSLGSADENAVTQADEGLKTVHLELTETCLD
MMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTITTSGGVRTQALLGLDMADR
LGGGGEMTRSDPSLHTRITKEAPAKLESQSSQQHNRATRIRVRSMSGGHALRAGPAQSLS
PLVSPSESELAAPLSPSSGPTLDGLGPPSSTSATPSAPPPLKDNPSLAEFVPMLTQGWAE
IFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSTVLMAMEGVKEPPAQTASAPASTA
APAPAPVSEPLTQTHSSVGGKAHLIQRSNTDSVVVLEEGSGVTTAHTPSDWLENDEFEPM
PSDPIFMSTDKFTKTPAPGTLSRSSSTSSQDEEKSTLEEVSEGAIPIDQPTLGPSTPGSQ
GPELPFQTHTQSQGHGLNKSSSSPELQTLPEAFSKAAMESETAAGDAPRPRAPSEGKPQP
QPQPQPQPQPQPQPQPQLPHFEKDKVEGSLAGDVNGLGGQSQAGEGPAVQSSQSGGARMR
LEFPAAAAQPGPISPSGGHRPRGHTISVSAPSSRRERRTERDSYHSRPGPSNTEKISGLS
PSFVFLQLYHSPFFGNEANKPLLLPKTQVIDRAVKVLDQMPPYDTHKIGVVFVGAGQVNN
EVAILSNEYGSNRYAAFLTGLGKLIHLKDCDPDQIFLGGLDQYGDDGEFTYCWHDDIMQA
IFHIATLMPNRESDKGCCNKKRHIGNDFVMVVYNDSGEEYKLGTIKGQFNFVEVIIKPLD
YECNLVTLQCRKDLEGLVDTTVAKIVSDRNLPLLVRQMALHANMASLVHQYRANPSDAYA
SKWLARLRHIKRIRTRAQEDIQSRSTPGISLTQGHTQQNKSFQQNTPASNPETSGQRKRL
VSTVDDFTDFV
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcagcccagcaaggagagcctgaaggacaaggtgaaggggatctttgggctc
ggacccccacgtccaccgagcaaacaaactgacgccaaaccgtccgagtttattatcaca
actgacatcatcaaggagctccacccggactgtggtctgagcaaccgagttcgcatgatg
aaccacgtctgtgatcttgcaaaaaccaagaaatttgaggagcacgcagtggaggcagta
tggaaagctgtggaggacatgctgactccagaacagccacctgaggccagacacactgtc
ctgcagctgctcagagccataatacagggacaggtaggtacacaaacacacacacacaca
cacacacacacacacacacacacacacacacacacacacacacacacagtgaaacaaata
caaaatgcgtgtacagctcctttaatcagcatattaactgtttacgtgaagggtgagcgg
ctcggccctctgagagcctacttcttcaaggtgatcagagactaccaaccatgcaacgag
gacctctccgatcggctggaagtcttcaaagccttaactgagaacgggaaggacatcact
tacctagaagaggacatagcacgctttgtcctcctgtggatggacataggtctcacctct
gactttctccacgttctcgtaaatctggtgaagttcaacagctgctacctggaccagaac
gtttccatcatggtccaaaaaatctgtctcctgtgcaatagaacaacatcttcaacggat
attgaggtggctctacaagtactggatgcagtggtgtgttacaactgcctgccctcagac
tctctgactgtgtttatcataacactttgtcgtactgtaaacgtcaaggagttttgtgaa
tcctgctggaaactcatgaggaaggtgttagggactcacctcggccacagtgctatttac
accatgtgccgcataatggaagagagggtctacatggaggatgcgcccttgttgagagga
gcagtgttctttgttgggatggcgctgtggggtgcacacagactccccgccctcaaaaac
acacctacactagttctgccatctttctataaggctatgtcgtgcgccaatgaagtggtg
tcctatgaaatcgtcctttccatcaccagactaatcaagaagtacggcaaagagctgcag
gtggtcacctgggatattctgctgggcatcatagagcgactgctgcagcagatccagaca
ataggcagtgcagagttgaaggccatcgtctatgagttgttgacgacagtggaggagctg
tatgagcagaatgattaccatggctccacagagaagttcttcagtctggtggagaaatgt
gctgataagagacctgatgcgtcagtgctgaccctcatctcatacagggcccagtcgatc
cagcctgccaaagacggctggattcagagcctttaccgcctcatggagaaattcttcagg
aacgagactcgcagtgtgataaggatcaaagtgcttcatatcctgtccttcgttctcagt
accaaccgacaactctatgaggacgagctgattgaaatggtagtgattccccagctcagt
gggattgctgaagaccgggacctggctgtgagaaaacaggccacccagctactggtggat
ctcgctgagggctgcaacacacatcacttcaccagcctgctggacattattgagcgggtg
gccagccgctctctggtgtgttcagggcccttggaggtttctgagagggaccccacagca
gagtctcctatggaggacgttaggactgctatactgggactactggaaatccttcagagc
aaactctacagcctgccagccagtcatgccagtcgtgtttatgagttgcttatcagccac
ttgcagctccactacaagaacaagtactgttcagccatctcttccggcattagactccag
gtgtttgacttcttcctgatgatgcgagcagactcccttcaccgtctcggggtgcccaac
aaagacggggccatgaggttcagcccttactgctactgtgacacaggggaaccagagaag
cgagtcagtgagaagaagcctacaggttccacatctcctccggctggcagcccagctccc
ccggccgctcctcccccctctacacgctcagcctacctgccctactctcctgccttcagt
gttctcctgcagtgcctcaagatggagacagattggaaggtgctgaagctggttctcgac
aagctgccgtggacgctgcagtacaaagtgctgctgctcacctcaccgtgcagcttggat
cagctctgctctacgctctgctgcatggtgacggatcggctgatctcagagcgcttgaag
aagaccccagaggggttttcacgaactgacgttcagctggcggtggttcctgtcctcaca
gcaatcacctcctaccacaactacctggagcagtcaagacagagagagctggttcagtgc
ctcgagaccggcctcatttaccgctgtgccaagcagtgtgtggtggccctcacaatgtgc
acagtggaaatgcctgacatcatgatcaagctccttcccgctctcattgtcaagcttacc
cacatctctgcaactgttgccatggcatctccaatgcttgagttcctctcaactctggtg
cgcctgcctcatctgtatgccaactttgtagctgagcagtatgttagtgtgtttgccatc
tcactaccctacactaacccttccaagttcaaccagtacattgtgtcactggcccaccat
gtgatcgccatgtggttcatacgctgcagactccccttccgcaaggactttgttcaatac
atcacaaagggtttgcgttccaatgcactgctgccattcgatgacggtcacgagcaaagt
tcatttcgcgcccgcagcaccagcctcaatgaaaggcccaagagtctgcgagcggcaaaa
gtggcgaaggcggcggcggcggtagccaatagcagcagctctccagttaaagagctgagg
gacctgtcagccatggacgctttccgttcccgcagcatcagcgtctccgaacacgcggtc
cgcaggatgcacacatcaaccaccacctgcagcctgggctccgctgatgaaaacgcggtg
actcaggctgatgagggcctgaagaccgtccacctggagctcactgagacctgtctggac
atgatggcacgatatgtgttttccaacttctcagcgctgcccaagaggtctccaatagcg
gaatttctgttggcaggaggtcgcagtatgacctggctggttggcaacaaactagtgact
ataacgaccagcggaggggtcagaacgcaagctctgctgggcctggacatggctgatcgg
cttggaggaggaggagaaatgacgaggtccgatccatcactacacacccgaataaccaaa
gaggctccagccaaattggagtcacagtcaagtcagcagcacaacagagccacacgcata
cgggtccgctccatgtcaggtggtcacgctctacgtgctggtcctgcccagagtctcagc
ccgctagtttccccctccgagagtgagttagctgctccgctgtctccctcctcgggtccc
accctggatggcctgggtcctccctcctccacctccgccaccccatctgctcccccacct
ctcaaagacaaccccagcctggctgagtttgtcccaatgctcactcaaggctgggcagag
atcttcattcgaagaccgtctggcaacacgagctggctgatgtgtttggagaacccaccc
agtcccttctcctctgagctcggcaacatgccgctgcaggagctctctaccgtcctcatg
gcgatggagggagtgaaggagcctcctgcccagacagccagcgcccccgccagcaccgct
gcccccgcaccagcccccgtctccgagcccttaacccaaacacacagcagtgtcggaggg
aaagcacacctgatccagcgctctaacactgactccgtggtggtgctagaggaggggtca
ggggtcaccacagcacacaccccatctgattggttagagaacgacgagtttgaaccaatg
ccatctgatcccatcttcatgtccaccgataagttcacaaagactccggctcctgggaca
ctcagcaggtcctcctccacctccagtcaagatgaggaaaagtctactctggaggaagtg
agtgagggagccattcccattgatcagcctactctgggaccttccacaccaggcagccag
gggcccgagcttccattccagacccacactcagtcccaaggtcacggactcaacaagtcc
agctcctctccagagctccaaactttacccgaagccttctccaaagctgctatggagtca
gagactgcagcaggagacgcaccacggcccagagcaccttcagagggcaagccgcagccg
cagccgcagccgcagcctcagcctcagcctcagcctcagccacaaccgcagctgcctcat
tttgagaaagataaggtggagggcagtttggcaggggatgtgaatgggcttgggggacag
agtcaagcaggtgaaggcccggctgtacaatcgtctcaaagtggaggagcaagaatgagg
ttggagtttccagcagctgcggcgcagcctggacccatttcccccagcggaggccaccgc
cctcggggtcacaccatctcagtatcagccccgtcctccagaagagagaggaggacagag
agggactcgtaccacagtcgacccggacccagcaacacagagaagatctctggactgagc
cccagctttgtctttctccagctgtaccactctcctttctttgggaatgaagccaacaag
ccgctgctgttgcccaaaacccaggtgattgatcgtgctgtgaaggttctggaccaaatg
cctccttatgacacccataagattggagtggtgtttgttggagctggtcaggtgaacaac
gaggtcgccatcctgtcaaatgagtacggatcaaaccgctacgccgctttcctgacaggc
ctcggcaaattaatccatctgaaagactgcgatccggaccagatcttcctcggagggctc
gaccagtacggagatgacggagagttcacctactgctggcacgacgacatcatgcaagct
attttccacatagcaacactaatgccaaacagggagagtgacaagggctgctgcaacaag
aagcgtcacattggcaatgattttgtcatggttgtgtacaatgactctggggaggaatat
aaactgggcaccataaagggtcaatttaactttgtagaagtgattataaaaccactggat
tatgaatgtaacctcgtcaccctacagtgccgcaaagaccttgaagggttagtagacaca
actgtggcaaaaatagtttcagaccgcaaccttccactcttggtcagacagatggctctg
catgcaaatatggcctctttagtgcatcagtacagagccaacccctctgatgcgtatgcc
tccaagtggctcgcaagattacgacacattaagaggatcaggaccagggctcaggaagat
atacagtctcgctcgactcccggcatctcgctgacccaaggacacactcagcagaacaag
tcgtttcagcagaacactcctgcgtccaacccagaaacctctgggcagaggaaaagactt
gtatcaacagtggatgatttcactgattttgtttga
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integrated database retrieval system
