Scomber scombrus (Atlantic mackerel): 133985724
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Entry
133985724 CDS
T10651
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133985724 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133985724 (atrx)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133985724 (atrx)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
133985724 (atrx)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
133985724 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
133985724
NCBI-ProteinID:
XP_062281388
LinkDB
All DBs
Position
9:complement(21279796..21307430)
Genome browser
AA seq
2139 aa
AA seq
DB search
MSLASSESNLDQMAENAQEPGSSTETMKSSSSHNKRKPTTVAKHTGLNESDTSAESENEG
ATSGNPSDSNTGSASKGTLVIRPAGNENKGAMKLRVDFKQKQKDDTLVNCTACGKQVNQF
QRNSVYEHPALKVLICKSCYKYYTSDDISRDSDGMDEQCRWCAEGGKLICCDYCNNAFCK
KCILRNLGRRELSTITDENSKWHCYVCRSDPLLDLVSKCHGVIEKQNHETHEKLKQRKTD
KTEERESKRHENKTVKEHKAVVNGKEHTEGSGTMTFSYKKLQLPKELIKKAKNLVETTTG
LNNTFIQFIQQTAEEQGDKAIRYRHLKAFKAVLADLKKAHTALEAALEPEFKNMELQNGN
EGQHIVKKSTIAAPPAENDHVDNAANKADAVAGAEADAVAEADAGAEADADAEADAVAEA
DAGAEAGASAEAGASAGAEADAVAEADAVAEADAGAEADAGAEADAGADAIEEAGASDEV
DAPEEADAADEANTFDEAEATEEVDAAVEEQGMKQDVDNNQVSNVAEMRDNQTETDVTKK
TIKTEVCDELMSPGEMSLDHDIMSVPPSVPEELFQMVESLADPATLSQTPDTNPAKVVDA
DKKSNGTSSDSPRPQPKVKNLIVKLTPVPVVTTCGSRSSRSKNKEKDGETVKKCKKEKKD
DASDTVDGTESPPPSRRSSRVKTTPLRKQAENKGKEDSSESESEEDHKGKSKSSKKSSST
KKEDRKQSKTSLSEKKTEDSDSDEVPNILLKKAAEGHSSDEEQGSTSAKKRLFKVNNTSS
HDTDKASKRKRESESSESDKGKKSSKKKKQTGSASSNSDSDQEKETKSKVGTAKRRSTRV
KKQNEAKEEEKDSPERKGSSRKRSYEKKRKGKSPKGVSKLQSSSSEDEEEQQAEGDSGED
SDEQKIKPIVEENVAGGNGNFHQSSGDEMDGKEVSQVFEDDDDDDPENRIAKKMLLAQIK
SNFSSGAESSSDNEDADKDDKSSMKVKKEEDDDDEEQQDDDDSDDSGSDVEVKKHGRRHK
LLKHKLSLSEGESGDEKATSKDKKNKGGKKKAGRRAVDSDDSADSNFEKSESSAESSAES
SAESGISEELSESDNDGKRKTRAAKKKDEEKRSYKQKKKRRRIKVQDSSSSNEKSGAEDD
GEKDGDDRKGRKKIRKILKDDKLRMETRDALKEEEDRRKRIAEREALRKKLRETIVVEES
SQVACPITTKLVLDEDEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKMEKST
GSGCILAHCMGLGKTLQVVTFLHTLLLCEKIDFTRALVVCPLNTVLNWLNEFEKWQHGMK
DDESLEVIELATVKRPQERGYALQQWHESGGVMIIGYEMYRNLTQGRNIKSKKLKELFQK
TLVDPGPDIVICDEGHILKNEASAVSKAMNSIRTRRRVVLTGTPLQNNLIEYHCMVNFIK
ENLLGSVKEFRNRFVNPIQNGQSADSTLHDVRIMKKRAHILYEMLNGCVQRKDYTALTKF
LPPKHEYVLSIRITPIQCKLYRYYLEHFTGVGNAMEGGRGRAGTKLFQDFQMLSRIWTHP
WCLQLDYISKENKGFFDEDSMEEFIASETEESSMSLSSEDEKKRKKKKQGKGKRRGSDDS
DSDDVEVIKEWNTSSRGNGNGNGLGRNRAEPVEERKSAPRTGSAPGSPTPDWHKEFVTEA
DAEILEHSGKMTILFEVMRMAEEVEEKVLVFSQSLISLDLIEDFLELACRAKDEEKISPY
KGEGKWFRNIDYYRLDGSTNATNRKKWAEEFNDPSNPRGRLFLISTRAGSLGINLVAANR
VIIFDASWNPSYDIQSIFRVYRFGQVKTVFVYRFLAQGTMEEKIYERQVTKQSLSFRVVD
QQQIERHFTMNELAELYTFEPDMLDDPSAKKSKKATPVLPKDTFLAEMLQSNKEQIACYH
EHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLTMRTNYQTAYGQMDMGASGYMPYNMAA
LATMTNQQLEDLINQGRQKVIEATNALKSLPREPLEDIIGRVWEENPSLTETQVQSMALG
RQASVELELKRREAVYRDVLTRQQTLMMYVQKLITNRKVQEQQLAMANQATYLNQFAMQN
GMIGGGGLSQIDLLGLYQQLHGMGSHQAMGKNPGPSKGL
NT seq
6420 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcctcttctgaatctaacttagaccaaatggcagaaaacgcacaggagcct
ggtagctcaacagaaacaatgaagtcctcctcttctcacaacaagaggaaacccactact
gtagcgaagcacactggactgaatgaatccgacacctcagcagagagtgaaaatgaaggt
gccacttctggcaatccttcagacagtaacacgggcagtgcatctaaaggcactttagtg
ataaggccagctgggaatgaaaataaaggcgccatgaagctcagagtggatttcaaacag
aaacaaaaagacgataccctggtaaactgcacagcttgtggaaaacaagtaaaccagttt
cagcgcaactcagtgtatgagcatcctgcgctcaaagtacttatttgtaagtcatgctac
aagtattacacaagtgatgacatcagccgagactcggatggaatggacgagcagtgcagg
tggtgtgctgaagggggcaagctcatctgctgtgactactgcaacaacgctttctgcaag
aagtgcatcctgcgcaacctgggcagaagggagttgtcaaccattactgatgagaactca
aagtggcactgctatgtctgtaggtcagatccccttctggacctggtctccaaatgccac
ggcgtcatcgaaaagcaaaatcatgagacacatgagaaactcaagcaacggaaaacagat
aaaactgaggaaagagagagcaagagacacgagaacaaaacagtcaaagagcacaaagca
gttgttaatgggaaagagcacaccgaaggctcagggaccatgacgttctcctacaaaaaa
ctgcagttacccaaagaacttattaaaaaagcaaaaaaccttgttgaaacaaccacaggt
ctgaacaatacgttcatccagttcatccaacagacagccgaggagcagggagacaaagct
atcaggtatcggcatttgaaagccttcaaggccgtacttgcagatttgaaaaaagctcac
actgctttggaggcagccttggagccagagtttaaaaacatggagttacagaatggcaat
gaagggcaacatattgtaaaaaaaagcactattgctgcgccacctgcagaaaacgaccat
gtggataatgcggctaacaaggctgatgccgttgccggtgctgaagctgatgccgtcgct
gaggctgatgccggtgctgaagctgatgctgatgctgaagctgatgctgtagctgaggct
gatgccggtgctgaggctggtgccagtgccgaggctggtgccagtgccggtgctgaagct
gatgccgtcgctgaggctgatgccgtcgctgaggctgatgccggtgctgaggctgatgcc
ggtgctgaagctgatgccggtgctgatgccattgaggaggctggcgcttctgacgaggtt
gacgcacctgaagaggctgatgcagccgacgaggccaatacttttgacgaggctgaagca
actgaggaggttgatgctgctgttgaggagcagggaatgaagcaggacgtggacaacaat
caggtgtcaaatgtggctgaaatgagagacaaccaaacagaaactgatgtaaccaaaaag
acaattaaaactgaagtctgtgatgagctaatgtcacctggtgaaatgtccctcgatcac
gacattatgtctgttcctccttcggttcccgaggagctttttcagatggtggagagtctt
gcggatcctgccactctctcacagactccagacaccaatccagcaaaggttgtagatgct
gataaaaagtcaaatggaacatcatcagattctccacgtccgcagcccaaggtgaagaac
ctcatagttaaactgactccagtgccggttgtgacgacatgtgggtcaagatcttccagg
tccaaaaacaaagaaaaagatggagagacggtgaaaaagtgtaaaaaagagaagaaagat
gacgcttctgatacagtagatggaacagagagcccaccaccaagccgtcgctctagtaga
gtgaagaccactccactgaggaagcaggctgagaataagggcaaagaagactcatccgaa
tctgagtcagaagaagaccataagggcaagtccaagtcctccaagaaatccagcagcaca
aaaaaagaggatcggaagcagagcaagacctctttgtcagagaaaaagacggaagactct
gattcagatgaagttcccaacatcttgctaaagaaagctgcagaaggccacagttcagat
gaggaacagggaagcacaagtgcaaaaaagcgtttattcaaagtaaacaacacatcttca
catgatacagacaaggcatccaaacgtaaaagggagtctgaaagctctgagtcagacaaa
ggcaaaaagtcttccaagaaaaagaaacagactggctcagcctcctccaactctgattct
gaccaagagaaggagacgaagagtaaagttggcacagcgaagaggaggtccacccgtgtg
aagaaacagaatgaagcaaaagaggaagagaaagactcacctgagagaaaggggtcgagt
cggaaacggtcttatgaaaagaaacgcaaagggaagagccccaaaggagtctccaagctg
cagtcatcctccagcgaggatgaggaggagcagcaggctgaaggtgactccggagaagac
agcgacgagcaaaagataaaacccattgtggaagagaacgtggcgggaggcaacgggaat
tttcatcagtcctcaggagacgaaatggatggcaaagaagtttctcaagtttttgaagat
gatgacgatgatgatcctgagaacagaattgcgaagaaaatgcttcttgcccaaataaag
tccaacttttcctccggagcagagagttcctctgataatgaagatgcagacaaagatgac
aagtcctccatgaaagttaaaaaagaggaagatgatgatgacgaggagcagcaagacgac
gatgattcagacgactctggttctgacgtggaagtgaagaagcatggccgacgccacaag
ttgctaaaacataaactctcactgagtgagggagaatcaggagatgagaaagctaccagt
aaagacaagaaaaacaagggtggcaagaagaaggcagggcggagagcagtggacagcgat
gactctgcagactccaactttgagaagtcagagtccagtgcagagtcaagtgcagagtcc
agtgcagagtcggggataagtgaggagcttagtgaatcagacaacgatgggaaacgaaag
accagagctgcgaagaagaaagatgaggagaagagaagttacaagcagaagaagaagcga
cgcaggatcaaagttcaggattcatcctccagcaatgagaagagtggagcggaagatgac
ggtgaaaaagatggagatgaccgcaaagggcgcaaaaagattcgcaaaatcctgaaggat
gacaagttgcggatggagacgagggatgctctgaaagaagaggaggacaggaggaaacgt
attgcggagagagaggcgcttaggaagaaacttcgagagacgattgtggtagaggagtct
tcccaggtggcctgtcccatcaccaccaagctggtattggatgaggatgaagagaccaag
gagccacttgtgcaggtgcacaggaacctcgtcaccaagctcaaacctcaccaggttgac
ggggtgcagttcatgtgggactgctgctgtgaatctgtgaagaagatggagaagtctact
ggctccggctgcatcctcgcccactgtatgggactgggaaaaactctgcaggtggtgaca
ttccttcacactttgctgctttgtgagaagatcgactttaccagggcgctggtggtttgt
cccctgaacactgtcctcaattggctcaacgagtttgagaagtggcaacatggaatgaaa
gatgatgaaagtttagaggtgattgagctggccacagtaaagaggccacaagagcgaggg
tatgccctccagcaatggcacgagtcagggggtgttatgatcatcggctacgagatgtac
cgaaacctgacccagggaagaaacatcaagagcaagaagctcaaagagttgtttcagaag
actctggtagatccaggtccagacatagtaatctgtgatgaaggtcatatcctgaagaac
gaggcgtctgctgtgtccaaagcaatgaactctatcaggacaaggaggagagtcgtgctg
actggaacgcctctgcaaaacaacctcatcgaataccactgcatggtgaacttcatcaag
gagaacctgcttgggtcagttaaggagttcaggaatcgcttcgtcaaccccattcagaat
ggtcagtctgccgactccacactacacgatgtccgcatcatgaaaaagagagctcacatc
ctctatgaaatgctgaatggctgcgtccagaggaaagattacacagcactcaccaagttc
ctgccccccaaacacgagtacgtgctgtcgatcagaattactccaatccagtgtaaactc
tacagatactatctggagcacttcaccggtgtggggaatgctatggaggggggccggggc
cgcgcggggaccaaactcttccaggatttccagatgctcagcagaatctggacccatccc
tggtgccttcagctggactacatcagtaaagaaaacaagggtttctttgacgaggacagc
atggaagaattcatcgcttcagaaaccgaagaatcctctatgagtctgagctctgaggat
gaaaagaagagaaagaaaaagaagcaagggaagggaaaaaggaggggatctgatgactcg
gacagtgatgatgtggaggtcatcaaggagtggaacaccagctctcggggaaacggaaac
ggaaacggattgggtcgaaacagggcagagcctgtagaggagcgtaagtctgctccacgc
actggctcagcacctgggagccccacccctgactggcacaaggagtttgtcacagaggct
gatgctgaaatcctggaacactccggaaagatgacgatcctctttgaggtcatgcgcatg
gccgaagaagtagaagagaaagtgttggtgttcagtcagtctcttatctctctggacctg
atcgaggatttcctggagctggcttgcagagctaaagacgaagaaaagatctctccatac
aaaggtgaaggcaagtggttcaggaacattgactactatcgcctggatggctccactaat
gccaccaacaggaagaagtgggcggaagagtttaatgaccccagtaacccgagaggtcgt
ttgttcctcatttcgactcgagctggctccctcggcatcaacctggtggcagctaaccgg
gtcatcatctttgacgcctcctggaatccctcgtatgacatccagagtatcttcagggtc
taccgctttggtcaggttaagaccgtcttcgtctacagattcctggctcagggtacaatg
gaggagaagatttatgagcggcaggtaaccaaacaatctctgtcattccgggtggtggac
cagcagcagatcgagaggcactttacaatgaacgagctggctgagctctacacctttgag
ccggacatgctggacgatccctcggcgaagaagagcaagaaagccacgcctgtgctccct
aaggataccttcctggccgagatgctgcagtccaataaggaacagattgcgtgttatcac
gaacacgactccctgctggaccacaaggaggaggaagccctaagcgaggaggatcgcaag
gctgcctgggccgagtacgaagcagagaagaagggtctgaccatgaggaccaactaccag
acagcgtacggacagatggacatgggcgcctcgggctacatgccctacaacatggcggct
ttggccaccatgaccaaccagcagctggaggaccttataaaccaggggcggcagaaggtc
attgaagcaacaaatgcattgaagagtttaccgcgggagccacttgaagacattattggc
agagtgtgggaggagaacccttcactgacagaaacccaggtccagtccatggctctggga
cgacaggccagtgtggagctggagctcaaacgtagggaggccgtttacagggacgttctc
accaggcagcagacgctgatgatgtacgtgcaaaagctgatcaccaacaggaaggtccag
gagcagcagctggctatggctaaccaggccacctacctgaaccagtttgccatgcagaac
ggcatgatcggaggtggcgggctcagccagatcgacctgctggggctttaccaacagctc
cacgggatgggctcccaccaagccatgggcaagaaccctgggccctccaagggcttgtag
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integrated database retrieval system
