Scomber scombrus (Atlantic mackerel): 133985881
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Entry
133985881 CDS
T10651
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133985881 (rnf20)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133985881 (rnf20)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
133985881 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
HAT1_C
zf-RING_2
zf-rbx1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
133985881
NCBI-ProteinID:
XP_062281594
LinkDB
All DBs
Position
9:complement(18371070..18382053)
Genome browser
AA seq
1020 aa
AA seq
DB search
MSGQKRPADPSGPSSSGAPPEKRRERDGEDGGPGVSAAAGGATAVETVIKLGGVSNTEEQ
DIKALQAKNRKLGEALDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQLDENIQL
IIRRYDQSPSEPEKSPAGEGRSLKPETPEPDGDSNQERAKERGHQGETSNSFLATLASSS
SEEMEAELQERVESSQKQANRVVEIYVRLRSTVDQLKTELDSEAEGTLWQAASKLNALLT
SENERLQQLTEDLKQKHSHMTTESRSLGRAANKADQRVSELQVLIEELQWDMEKIRRREN
RLNAHLSEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENQELADNRLIELQ
KLQQDLQTVHQENNNMKTELLSRAEGMVKETSEYRCLQSQFSVLYNESLILKAQLDETRA
RLNTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQTHNQQMKGEVVKYKIRLRETQTELNQIRSSKGNAILQFQSSTE
MDVKDETTSPSTLAVSGDPVVKTDPDNGSSTPSSTGASVKTESGVESDPTVKEEEKEEKK
EKEEKKEKDIIKKEEKDREREKEKERERPTRSGVIKEEKEKPGSSTQLEESAGERLSMVG
GSKRKEIEQLKIVRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAKSEGDE
LRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDVTG
QAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVD
AQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQDSASLSEEVRTQLEQVQQ
RLRLVREEVVENSISREKESFNARRAQEDISKLRRKIEKAKKPAEKISNGDDILNEEISE
YKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagaagcgtcctgctgaccccagcggtccctcgtcctccggtgcgccccca
gagaagcgcagggagcgtgatggagaggacggaggtcctggtgtcagcgccgctgccgga
ggggccaccgcggtggagacggtcatcaaactgggaggggtgtccaacacagaggaacaa
gacatcaaagctctccaggccaagaaccgaaagttgggagaagctcttgatcaaagacag
gtgattgaggatgaactgcgagagcgaattgaaagactggagacccgccaggccactgat
gatgccagtctgctgatccttaatagatactggaaccagcttgatgaaaacattcagctt
atcatcaggcgttatgaccaatcacccagcgaaccagagaaatctccagcaggtgagggg
cggagcctgaagccagaaactcctgaacccgatggcgactccaaccaggaaagggccaaa
gagagaggccaccagggagagacgtccaactctttcctcgccacgctggccagcagcagc
agcgaggagatggaggccgagctccaggagagggtggagtccagccagaagcaggccaat
cgcgtggtggagatctacgtgcgtctaaggagcactgtggaccaactgaagacagagctg
gactctgaagctgagggcactttgtggcaggcagcttccaagctaaacgccctcctgacc
agtgaaaatgagcggctacaacagctgactgaagacctcaagcagaaacacagtcacatg
accactgagtcccggtctctggggcgggcagcgaacaaggcagaccagcgtgtcagcgag
ctgcaggttctgatcgaagagcttcagtgggacatggagaagatccgtcgacgagaaaat
cggctcaatgcacacctgagcgagattctggagagggtgaacagcaaaggctataaggtg
tgtggggaggccagcagcgtatgtgggaccatcactattaacaagagaaagtttgaggaa
atgaacagcgagttggaggagaaccaggagctcgcagacaaccgcctcattgagctgcag
aagctccagcaggacctgcagactgtccaccaggagaacaacaacatgaagacggagttg
ttgagtcgagcggagggcatggtgaaggagacttccgagtatcgatgtcttcagtcacag
ttttctgtgctttacaacgagtctctgatcctcaaagctcagttagatgagacacgcgct
cgccttaacactacaaggacggcacgccttcgacagctggagcacatggagaatgatgaa
gttgctctgcagaggaaagttcgcacagaggtgtttcagctggaggacacactggcccag
gtcaggaaggagtatgagatgttgcgcatcgaatttgaacagactctcgctgccaacgag
caggcaggccctattaacagagagatgcgccatctgattagcacgcttcaaactcacaac
cagcagatgaagggagaagtcgtgaaatacaaaattagactgagagagacacaaacggaa
ctcaatcagatccgttcttcaaagggcaacgccatcctccagttccaatctagcacagag
atggatgtgaaagatgagacaacctctccttcgaccctagctgtttcgggggatcctgta
gtcaagacagaccctgacaacggctcctctacacccagcagtactggcgcctcagtgaaa
accgagtctggagtagaatctgaccccacagtaaaggaggaggagaaagaagagaaaaaa
gagaaggaggaaaagaaagaaaaggacattattaagaaagaggagaaagacagagagagg
gagaaagaaaaggagagggagaggccaacccgcagtggtgtgataaaggaagagaaggag
aagccagggagcagtacccaactagaggagtccgccggggagcggctgtccatggttgga
ggatccaagaggaaggaaatagaacagctgaagattgttcgagcagagctcaagaaagct
caggagtcccagagggagatgaagctgctgttggacatgtaccgctcagcacccaaggag
caaagggacaaagtccagctcatggctgcagagaagaaagccaagtcagagggagatgag
ctgcggcagaggctgagggagctggaggagagagagaggagggaaggaaagaaaatggca
gacgaagaagctcttaggaagatccgctctgtggaggagcagatcgacatcctcaacaag
aagctgtctattgcaaaacaggaggaggacgcgctgctgagcgagatggacgtgacgggc
caggccttcgaagacatgcaggaacagaacatccgtctgatgcagcagctcagagaaaag
gacgatgccaacttcaagctgatgagcgagcgtatcaagtcaaaccagatccacaagctg
ctaaaagaggagaaggaggagctggctgaccaactactgactttaaaaactcaggtcgat
gcccagctgcaggtggtgaggaagcttgaggagaaggagcgcctcctgcagggcaccatc
agtactgctgagagagagttggcactgcggacgcaggctttggacatgaacaaacgcaag
gctcaggactcggcgtcgctgtcagaggaggtgcgaactcagttggaacaggttcagcag
aggctccgcctggtcagagaagaggtcgtagagaacagcatctcgagggagaaggagtcc
tttaatgcccgacgagcacaggaggacatctccaaacttaggagaaagattgagaaggcc
aagaaaccagctgagaaaatcagcaacggagatgatatccttaatgaagaaatcagcgag
tacaaggcacgtctaacatgtccgtgctgcaactcccgcgtgaaggatgcagtcctgaca
aagtgcttccacgtcttctgctttgagtgcgtgaagactcgctacgacacacgccagagg
aagtgccccaagtgcaacgctgctttcggagccaacgacttccaccgcatttacatcggc
tag
DBGET
integrated database retrieval system
