Scomber scombrus (Atlantic mackerel): 133985899
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Entry
133985899 CDS
T10651
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133985899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133985899
03036 Chromosome and associated proteins [BR:
ssco03036
]
133985899
Spliceosome [BR:
ssco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133985899
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133985899
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
zf-C2H2
PHD_2
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
133985899
NCBI-ProteinID:
XP_062281622
LinkDB
All DBs
Position
9:complement(16447163..16456232)
Genome browser
AA seq
407 aa
AA seq
DB search
MAAAVDSVVKVLGEQYYRDAMEQCHSYNARLCAERSILMPFLDSQTGVAQSNCYIWMEKR
HRSAGVAPGQLYTYPARRWRKKRRSHPPEDPRLAFPSLKAADLDLGLKRETLGAVDGSSL
EALLKGEPLDRRSGVSDLRGPENDEATVEPPATSATTHTSSGRIRKRVLDHDDYLDDLDD
DDFEDETPKRRGKSKSKGRSDKNGKKKTEAAAAAMEERDKPYACDICGKRYKNRPGLSYH
YTHSHLAEEEGEDREEIEAPPTPRQPEEQKTTKKGPNGLALPNDYCDFCLGDSTLNQKTG
QSEELVSCSDCGRSGHPTCLQFTPVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDD
CDRGYHMYCLTPPMTEPPEGSWSCHLCLVLLKDKASIYQQNQSSAPE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgtcgacagtgttgtgaaagtgctgggagagcagtattacagagatgcc
atggagcagtgtcacagttacaacgctcgactgtgtgctgagcgcagcatcctcatgccc
ttcctggactctcagactggtgtggctcagtccaactgttacatctggatggagaagaga
caccggagcgcaggtgtagctccagggcagctgtacacctacccagcccgtcgctggagg
aagaaacggcgttctcatccccccgaggacccccgcttggccttcccttctctcaaagca
gcagatttggacttgggactgaagcgtgaaactttgggggccgtggatggcagcagtctg
gaggccctgctgaagggggagccccttgacaggaggagcggagtatcagacctccgtggc
cctgagaatgatgaagccactgtggagcctcctgccacctcggcgaccactcacacatct
tctgggcgtatccgcaagagagtcctggaccacgacgactacttggatgaccttgatgat
gatgactttgaggatgagacccccaagaggcgaggcaagagcaagtccaagggtcgcagt
gacaagaatggcaagaagaagactgaggctgcagctgcagcaatggaggagagggacaaa
ccatacgcctgcgacatctgtgggaagcgctacaagaaccgtccaggcctgagctaccac
tatacacactctcacctggcagaggaggagggcgaggaccgcgaggagatcgaggcacca
cccactcctcgccagcctgaggagcagaagacaactaagaagggtccgaacggactggcg
ctgcccaacgattactgcgacttctgtctgggagactccaccttaaaccagaagaccggc
caatcggaagagctggtatcctgctcagactgtggacgctcaggccacccaacgtgcctg
cagttcacacccgtgatgatggcagcagtgaagacctaccgctggcagtgcattgagtgc
aagtgctgcaacgtctgcggcacctcagagaatgatgaccagctgctgttctgtgacgac
tgtgaccgaggctaccacatgtactgtctaactccccccatgactgaaccccccgagggg
agctggagctgccacctgtgcctggttctgctgaaggacaaagcctccatataccagcag
aaccagagctccgcccccgagtga
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integrated database retrieval system
