Scomber scombrus (Atlantic mackerel): 133985997
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Entry
133985997 CDS
T10651
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssco03016
]
133985997 (elp1)
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
133985997 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_HPS5
B-prop_COPA_B_2nd
Cas_Csm6_6H
Motif
Other DBs
NCBI-GeneID:
133985997
NCBI-ProteinID:
XP_062281741
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All DBs
Position
9:4989766..5005016
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AA seq
1317 aa
AA seq
DB search
MRNLKLLKSLRSSELQGPGSPQCFSVRADTSSLLVASPYSITEFDPRTGQVVSEASLTAD
GFLPEDGTGLVVGLQDLAELESACLATATGDVVLFNLNTCQLECVGSVDSGLTSMSWSPD
EELVALTTGQETVIMMTKDFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAH
KKSQEVQPTAVWDDRRPRVTWRGDGQLFAVSAVCPQTGARKVRVWNREGVLQATSEPVNG
LEQALCWKPSGSLIASTQRHPNKHSVVFMEKNGLLHGDFTLPFSKDQAKVKELLWNSDST
VLAVWLEDMTAGEDGQVNTYIQLWTVGNYHWYLKQSLEFGRDHQKAPVSVCWDPERPLRL
HVVNRSWTTITYDWGWTTERSLGLDAADKANVAVIEGDKVLVTTFRQCVVPPPMCSFELQ
LTSPVNQVTFLCKPQGTNQLSAFTADGNISIFSQDSGEQTTDKTADGFRNMSRPLVLQKT
LRVSVLQEEPLALRQLLWLEDELFVGVSSSLLPTSSTLLLLRPAEDATDTLSVRSEVEVD
GMVVSMVHSSQTGTVALQLEDGQIKKLLYDGPELSVKDWRDFSGCTINFPVPCVQTALCS
ISGEEYLLGLTDRSHLYAGDTELASNVSSFAVCNDFLIITTHSHTCRCLQLSTLSVKALQ
AALASDGGENDETLRRVERGSRIVTVVPQDTRVILQMPRGNLETVNHRALVLAQLRKWLD
SLRFKEAFDCMRKLRINLNLIYDHNPKVFLETIIAFITQLNSINHINLFLTELKEENTTS
TMYPPPEGSPVQPQPASGMKKVDIVCDALRSAMESMDPNKFCLSILTTHVKKTVPELEIA
LQKVHELRVNPPEAPGAVSAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKDP
KEYLPFLNMLKSLEPNYQRYTIDKHLKRYRKALLHLSKCGQEHFPEALQLVKEQKLYNEA
LRLYAADKAQYKALSCAYAEHLMEQQQAEQAGLLLWRCGEPASALQAFASSSSWRNAICV
AQQLPLPPDQLALLARDLAEKLIEQRRYSEAALLLDQYAKDCEEAILALINGAVWEEALR
LIYMHNRQDITETNLKPALLDAFGAQTVFLEAQVAAFTRHKTRLALVREQKEKARLNMLD
EDGPDCPDAELYSEASSVMTGSKYSHSNSRISSRSSKNRRKAERKKLSLKEGSPMEDRAL
MYALSEIITTVDKMREEVHNLLKALVLFQFDRQAEKLQLVYEEALQMMEAAVPEVWPEGL
QNNQAPLTGPNSTANSIMASFQQQQQQQKPVTSQQDAEIPPPPKMRNGVKWKLIVLK
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctaaagctgctgaagagcctgcggagctcagagctgcagggtccgggctcc
ccgcagtgtttctcagtgcgggcagacacaagctcgctgctggttgcctctccgtactcc
atcacagagttcgacccccggactggtcaggtggtgagcgaggcctcgttgacagctgat
gggtttctccccgaggacggcaccggtttggtggtcggactgcaggacctggcagaactt
gagtcggcatgtttagccacagccaccggtgacgtcgtcctcttcaacctcaacacctgc
cagttggagtgtgtcggcagtgttgacagcggtctgacatcgatgagctggagtcctgat
gaggaactcgtcgctctcaccactggtcaggaaacagtcatcatgatgaccaaagacttt
gagccgatcactgaggtcggaatccaccaggacgactttggtgaaggaaagttcatcacg
gtgggttgggggaagaaggagactcagtttcacggctcagaggggaaacaggcagcacac
aagaagagccaggaggttcagccgacagcagtgtgggacgaccgcaggccccgggtgacg
tggagaggtgacggccagctgtttgccgtcagcgccgtctgtcctcagactggagccagg
aaggttcgggtctggaacagagagggcgttttgcaggccaccagtgagcccgtcaatggc
ctggagcaggcgctgtgctggaagccttcaggcagcctgatagcgagcactcagcgtcat
cccaacaaacacagcgtggtgttcatggagaagaacggactgttacatggagacttcact
ctgcccttcagcaaagaccaagctaaggtgaaggagctgctgtggaacagtgactccact
gtgttagcggtttggttggaagacatgaccgctggagaggacggacaggtcaacacttac
atccagctgtggacggtgggaaactaccactggtatctgaagcagagcctggagtttggc
agagaccatcagaaggctccagtcagtgtgtgctgggatcctgagcgccccctacggctc
cacgtggtgaaccgcagctggaccaccatcacctacgactggggctggacgacggagagg
agcctcgggctggacgctgccgacaaggccaacgtggctgtgattgaaggagataaagtc
ctggtgacaaccttcaggcagtgtgtggttcctcctcccatgtgttcgttcgagctccag
ctgacgtcaccggtcaaccaggtgaccttcctctgcaaacctcagggaaccaatcagctg
tcagcattcacagctgatggaaacatctcaatcttcagccaagattcaggagaacagaca
acagacaaaacagcagatggattcaggaatatgtctagacctcttgtcctccagaaaacc
ctcagagtttcggttctccaggaggaacctctggccttgcggcagctgctgtggctggag
gatgagctgtttgtgggtgtgagctccagtctgctgccgacctcctccaccctgctgctg
ctccgccctgctgaggacgccactgacacactctctgtcaggtctgaggtagaagtggac
ggtatggtggtcagtatggttcacagctcccagaccggcactgtggcactgcagctggag
gacggacagataaagaaactgctctatgatggtcctgagctgtcagtgaaggactggcgt
gacttcagcggatgcaccatcaactttcctgttccttgtgttcagacggccctctgcagc
atcagtggagaggagtatctgctcggcctgacggacagatcccacctctacgctggagac
acagagctcgcctccaatgtttcctccttcgctgtttgcaacgacttcctcatcatcacc
acacactcacacacctgccgctgcctccaactgagcacgctcagtgttaaagcgctacag
gcagctttggcctcagatggaggtgagaatgacgagacgctgcggcgggtggagcgagga
tccaggatcgtcactgtggtgccgcaagacaccagagtgattctgcagatgccgcgtggg
aatttggagacagtaaatcatcgagcactggtgctggctcagctcaggaaatggttggac
agtttaagattcaaagaagcttttgattgtatgaggaagctgaggatcaacctgaacctt
atttatgaccacaacccaaaggttttccttgaaaccatcatcgccttcatcacacaactc
aactccatcaaccacatcaacctcttcctcaccgagctcaaagaggagaacaccactagt
accatgtaccctcctcctgagggaagcccggtccagccccagcctgcatctgggatgaag
aaggtagacattgtgtgcgatgctttacggagcgccatggaatcaatggatccaaacaaa
ttctgtctgtctatactgaccactcatgtgaagaagactgttcctgaactagagatcgct
ctgcagaaggtccatgaacttcgagtgaatcctcctgaagctcccggtgctgtgagtgct
gaagaggcgttgaagtacctgctgtttctggtcaatgtcaacgacctgtacgaacactct
ctgggaacgtacgacttcgacctcgtgctcatggtggccgagaaatcccaaaaggacccc
aaagagtatcttccctttttaaatatgctgaagagcctggagccgaactaccagcgctac
accatcgacaaacacctgaaacgctacaggaaggctctgctccacctcagcaagtgtgga
caggagcatttccctgaggctttacagctggtgaaggagcagaaactctacaatgaagct
ctgagactgtacgcagcagacaaagctcaatacaaggctctgagctgcgcctacgccgag
cacctgatggagcagcaacaggcggagcaggctggcctgttgctatggcgatgcggcgag
ccagccagcgccctgcaggcgttcgccagcagctccagttggaggaacgccatctgcgtc
gctcagcagttgccgctgccgccagaccagttagctctgctggcccgagacctggcagag
aagttaattgaacagcggcggtactcagaagctgctctgctgttggaccagtacgccaaa
gactgtgaggaggccatcttggctctgatcaatggtgcagtatgggaggaggcactccga
ttgatttacatgcacaacagacaagacatcactgaaaccaacctgaaacctgctctgttg
gacgccttcggtgcacagaccgtcttcctggaggctcaggtcgcagcgttcacccggcac
aagacccggctggctttggtccgagagcagaaagagaaggccagactgaacatgctcgat
gaggacggtccagactgtcctgatgctgagctttactctgaagccagcagtgtgatgacc
ggctccaaatactcccacagtaactcccgcatctcctcgagatcatcgaagaaccggcgg
aaggccgagcggaagaagctgagtctgaaggaaggaagtccgatggaggacagagcgctg
atgtacgctctgagtgagatcatcaccactgtggacaagatgagagaggaagtgcacaac
ctgctcaaagccctcgtgctctttcagtttgacagacaggcggagaagcttcagctggtg
tatgaggaggcgctgcagatgatggaggcagcagtgcctgaagtgtggccagaaggcctg
caaaacaaccaagccccgctcacagggccaaattcaactgcaaacagcatcatggcttct
ttccagcagcagcagcagcagcaaaaacctgtaacttcacaacaagatgctgaaatcccg
ccgccaccaaagatgagaaacggtgtgaagtggaagctcattgttcttaagtaa
DBGET
integrated database retrieval system
