Scomber scombrus (Atlantic mackerel): 133986016
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Entry
133986016 CDS
T10651
Symbol
rmnd5b
Name
(RefSeq) E3 ubiquitin-protein transferase RMND5B
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133986016 (rmnd5b)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133986016 (rmnd5b)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
133986016 (rmnd5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
Rtf2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
133986016
NCBI-ProteinID:
XP_062281767
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Position
9:21500660..21506256
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AA seq
391 aa
AA seq
DB search
MEQCACVERELEKVLHRFVMYGHQSEERLDELLRSVCEIRGQLVAFGVQDADLSVLSQTM
AQCCKNIKETVQMLASRHKDIHGSVSKVGKAIDRNFDAEISAVVAETVWDTPERQKYLSE
TIVEHLYRQGMLSVAEDLCQESGVVIDMSMKQPFLELNRILEALRMQDLRPALEWAVTNR
QRLLDLNSSLEFKLHRLYFISLLSGGIGNQMEALQYARHFQPFASQHQRDIQILMGSLVY
LRHGIENSPYRSLLETNQWAEICNIFTRDACALLGLSVESPLSVSFASGCMALPVLMNIK
QVIEQRQCSGVWTHKDELPIEIDLGKKCWYHSVFACPILRQQTSESNPPMKLICGHVISR
DALNKLTNAGKLKCPYCPMEQNPSHAKQIYF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtgtgcatgtgtggagcgggagctggagaaggtgctccatcgctttgtaatg
tacggccaccaatctgaagagaggctcgatgagctcctgcgcagtgtctgtgagatacga
ggacagctagttgcatttggtgtacaagatgcagacttgtcagtcctatctcagactatg
gcccagtgttgtaagaatatcaaagaaacagtgcagatgctcgcctcccgacataaggac
atccatggcagtgtgtcaaaagtgggcaaagccattgacaggaattttgatgcagagatt
agtgctgtggtggcagagacagtgtgggacaccccagagagacagaaatatctgagtgaa
accattgtggagcatctgtacaggcaagggatgctcagtgttgcagaggatttgtgtcag
gagtctggtgtagttatagatatgagtatgaagcagcctttcctggaactgaacaggatc
cttgaagctctgaggatgcaggatctcagaccggcactagagtgggcagtgacaaatcgg
cagcgccttttggacctgaacagcagtttagagttcaaattgcaccgcttgtacttcatc
agcctgctcagtgggggaatcggcaaccaaatggaggccctgcagtacgccaggcacttt
cagccttttgcctctcagcaccagagagatatccagatcctgatgggcagtctggtttac
ctgcgtcatggcatcgagaactctccgtaccgtagtttactggagacaaatcagtgggct
gaaatctgtaacatctttaccagagatgcctgcgctttactgggcctctccgtagagtct
ccactcagtgttagctttgcatcaggctgtatggctctgcctgtgttaatgaacatcaag
caggtgatagagcagagacagtgcagcggagtctggacgcacaaagatgagctgcctatt
gaaattgacctgggcaaaaagtgctggtaccactctgttttcgcctgcccgatcctgcgg
cagcaaacctcagagagcaacccacctatgaagctcatctgtggccacgtcatctccaga
gacgccctcaacaaactgaccaatgctgggaagttgaaatgcccgtactgccccatggag
cagaatccgtcacatgccaaacagatctacttttga
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