Scomber scombrus (Atlantic mackerel): 133986021
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Entry
133986021 CDS
T10651
Symbol
prom1a
Name
(RefSeq) prominin-1-A
KO
K06532
prominin 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133986021 (prom1a)
04090 CD molecules [BR:
ssco04090
]
133986021 (prom1a)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133986021 (prom1a)
CD molecules [BR:
ssco04090
]
Proteins
133986021 (prom1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-GeneID:
133986021
NCBI-ProteinID:
XP_062281774
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Position
9:complement(7108528..7188833)
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AA seq
860 aa
AA seq
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MWKTGILLLLLRVLQASGELEQETESRRLPPPGKLDFGYVPAGVYETLAHYEPGPIGILF
HMVHTYLYIVQPNAFPQDLLVKLAKDRFGAIQTEYQKAIYYEIGFLICAAVGLLFAILMP
IIGLFFCLCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVLCAYAANQNLS
SQVKNIRRLVNSNMRDLQTFANDTPMQIDYLISQYATAKNKVIYDLDNIGPLLGGRIHDQ
LDKEVHPALDKVLNMAGAMRETKEALENVSVSLEVLQEGTGKLNFNLSLVRVSINRTLND
PGCHDEDSDATTAQLCRNIRQSLSQLQISANFTRLPKVTTQLEKMNNVLRTDLSTIVQRG
YSSLNNTPNMVTEQTRSVVENVQSLVDDIGSNISSFTKAFPVQSCLSNFTIFISHAHAKI
EDYYPEIDQMDFYRWVGCIALCCMVVLVLAFNYLGLLCGTLGYDKHASPTTRGCISNTGG
TMLMAGVGFSFIFSWVLMGVVTVIFLTGGNLEKLFCEPFHTKELFKVVDTPYLVNSEWKN
FIPGYMYNDSDLELTSESLYSTCKENKGIYSAMRLDRVFNISSFLNTTVFTKDMVSQLDS
VKIDLRAIILLEAEGKQNLQDFSEAGLSEINYADYLEEVNKGVTVVDLLSFARELEAQTD
LMPRGPLQSALKGYVGTLRQIHSQQIIPMEQAMSALNQSMRFLERTASDLPNKVLAVLEA
IEIAQFLISQNATHLIKQETEKYTATLVGYFHQYVEWVRTSLAMEVAPCKPFSNMVDTAE
IIACSFLIDSMNTFWMGLGCSTLFLLPSVILAVKLAKYYRRMDTEDVYDDIETIPMKTIP
TYDTMNRFPRASAPPRHIDW
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagaccgggattctcctgctcctgcttcgggtgctccaggcgtccggcgaactc
gagcaagagacggaatcgcggagactcccaccgccgggaaagttggatttcggttatgtg
cctgcgggagtttacgagacactggcccactatgaaccgggaccgattgggattctgttt
cacatggtgcacacttatctgtacatcgtgcaacccaacgctttccctcaagatcttctt
gtcaaactggcgaaggacaggtttggagccattcagacggaatatcaaaaggccatctac
tacgagataggcttccttatatgtgcagcggttggcctgctgttcgccatcctgatgccc
ataatcggcctcttcttctgcttgtgccgctgctgtgataactgcggcggggagatgcac
caacggcagaggaagaacgcagactgtcggcgtggcctgctgggaacgctgcttttctcc
acctcgctggtcatcacgattggagtgctgtgtgcgtatgctgccaaccagaacctgagc
tcacaagtgaagaacatacggagactggtgaacagcaacatgagggacctgcaaaccttc
gctaatgacacaccaatgcaaattgattacctaatatcccaatacgccacagccaagaac
aaagtcatctatgacctagataatattggaccgttattgggtggaaggatacacgatcag
ttggataaggaggtccaccctgccctggacaaagtgctcaatatggctggagccatgcga
gaaaccaaggaagccctggagaatgttagtgtttctctcgaagtcctccaggaaggaacg
ggaaaactcaattttaacctgagcctggtccgggtcagcattaaccgcacactaaacgac
cccggctgtcatgacgaggattcagatgccaccactgcccagctgtgccgcaacatccgc
cagtcactgtcccagctgcagatcagcgccaacttcacacggctacccaaagtgacgact
cagctggagaagatgaacaatgtattgagaacagacctcagcactattgtccagaggggt
tactcctctttgaacaacacgccaaacatggtgactgaacagaccaggagtgtcgtggag
aatgtgcagagtctggtggacgatatcggcagcaacatcagcagctttaccaaggcgttc
ccggtgcagagctgcctgtccaacttcactatcttcatcagccatgctcacgccaagatt
gaggactactaccctgaaattgaccaaatggacttctacaggtgggttggctgtatcgct
ttgtgctgcatggtggtcctggtcctggccttcaactacctgggcctgctgtgtggcacc
ctgggatatgacaagcacgcctcgcctacaacacggggctgcatctctaacacaggagga
acgatgctcatggctggcgttggattcagcttcatcttctcctgggtgttgatgggagtg
gtgaccgtcatcttcctgactggaggaaacttagagaaacttttctgtgaacctttccac
actaaagaactctttaaggtcgtggacacgccatatctggtcaactcagagtggaagaac
ttcatccccggctacatgtacaacgactctgacctcgagctgacttcggagagtttgtac
agtacttgcaaagaaaacaaaggtatctactccgccatgcgtctggacagagtcttcaac
atctcctcgttcctgaacactacagtgtttactaaggatatggtgagtcagctggacagt
gtgaagatcgacctgagggcaataatcttgttagaggcggaggggaaacagaacctgcag
gatttctccgaagcaggactgtcagaaatcaactacgccgactacctggaagaggtcaac
aaaggagtcactgtggtggacctgctctcatttgccagagagctggaggcccagacggac
ctcatgcccagaggccctctgcagtctgctctgaaaggctatgtcggcactctgcggcag
atccacagccagcagatcatccccatggagcaggccatgagcgcactgaaccagagtatg
agattcctggagagaacagcgtcagacctgccgaacaaagtcttagcggttcttgaggcc
attgaaatcgcacagtttctcatctcccagaatgctacacatttaatcaaacaggaaaca
gaaaaatacacagcgacccttgttggctacttccatcaatacgtagaatgggtcagaaca
tctctggccatggaggtagcaccatgcaagcccttcagcaacatggtggacacagcggag
atcatagcttgcagtttcctgattgactctatgaacactttctggatgggcctgggctgc
agcaccctcttcctgctcccaagtgtcatccttgcagtgaaattagccaagtactaccgc
aggatggacacagaggatgtttacgacgacattgagacaattcccatgaaaaccatccct
acgtatgacactatgaacaggttcccacgggcctcggctcctccgaggcacattgactgg
tga
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