Scomber scombrus (Atlantic mackerel): 133986038
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Entry
133986038 CDS
T10651
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133986038 (rnf4)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133986038 (rnf4)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133986038 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-rbx1
zf_RING_Vps8
RING_XB3-XBAT31
Rtf2
Prok-RING_4
zf-C3HC4_4
zf-UDP
zf-RING_11
IBR_1
zf-RING_6
CoV_nucleocap
zf-RING_16
zf-ANAPC11
Rad50_zn_hook
DZR
Motif
Other DBs
NCBI-GeneID:
133986038
NCBI-ProteinID:
XP_062281795
LinkDB
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Position
9:complement(119832..126428)
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AA seq
214 aa
AA seq
DB search
MMLTCSCVSASGLTSDMNASQRKRRTTGSPPGSRSKSRAASRNANASRESDVDQNQNQNQ
DQNQEQEQTETISVLDQSVEDVVDLTCEEAAVVDLTHSDSVLLVEEGPQNRRTATGESYV
VSSDEDEATPPTLNATTLSSIQANSATRLTSGVISCPICMDSYSEIVESGRLVVSSKCGH
VFCSQCLRDALKSSHTCPTCRKKLTSRQYHPLYI
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaacatgttcctgtgtttcagcttccggtctgacgtcagacatgaacgcgtct
cagaggaagaggaggacaacaggaagtcctccaggatccaggtctaagagccgagcagct
agcaggaatgctaatgctagtagagagtctgatgtggaccagaaccagaaccagaaccag
gaccagaaccaggagcaggagcagacagagaccatcagcgtgctggaccagagtgtggag
gacgtggtggatctgacctgtgaggaagctgctgttgttgacctgacgcacagcgactca
gtgctgctggtggaagaaggtcctcagaacaggagaaccgccacaggtgagagttacgtt
gtcagcagtgatgaagatgaagccacgccccctaccctcaacgccaccacgttgtcttct
atacaggccaacagtgctaccaggttgacttcaggagtgattagctgtcccatctgtatg
gactcgtattctgagatagtcgagagcggccgattggtggtttccagtaaatgtggacac
gtgttctgcagccagtgtctgagagacgctctgaagtcatctcacacctgtcctacctgc
aggaagaagctgacctccagacagtaccaccccctctacatctga
DBGET
integrated database retrieval system