Scomber scombrus (Atlantic mackerel): 133986044
Help
Entry
133986044 CDS
T10651
Symbol
egr1
Name
(RefSeq) early growth response protein 1
KO
K09203
early growth response protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04371
Apelin signaling pathway
ssco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
133986044 (egr1)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
133986044 (egr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133986044 (egr1)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
133986044 (egr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3432
zf-H2C2_2
zf-C2H2
DUF3446
zf-C2H2_4
zf-C2H2_15
zf-C2HC_2
C2CH-3rd_BIRD-IDD
zf-BED
zf-C2H2_ZNF462_1st
zf-H2C2_5
Zf-C2H2_ZNF451_1st
Motif
Other DBs
NCBI-GeneID:
133986044
NCBI-ProteinID:
XP_062281802
LinkDB
All DBs
Position
9:19410743..19414965
Genome browser
AA seq
512 aa
AA seq
DB search
MAAAKTEMILPTLQISEPLSFPHSPMDNYPKLEEVMMLSSAGTPFLTASAPEGAGFGSGE
PGEQYDHLAGDTLPDIPFNCEKSVAEQAYQTQKLPPISYTGRFTLEPATSCSNSLWAEPI
LGLFTGLMGNIPSSSTSSSAASLTISSSPSSIPSSSTSSSSTSSSSQSSSLSSSIHHSEP
NPIYSAAPTYSSPNSDIFPDQGQSFSNSVGTVQYPPPAYPNSKTCSTSFPVPMIPDYLFP
QQQGEISLVPPDQKPFQSQSSQPSLTPLSTIKAFATQTGSQDLKNVYQSQLIKPSRMRKY
PTRPSKTPPHERPYACPVETCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT
THIRTHTGEKPFACEICGRKFARSDERKRHTKIHLRQKDKKAEKAGAVVVTAAPVSAPSP
ASSYPSPITSYPSPVSSYPSPVTSCYSSPVHTSYPSPSIATTYPSVSMSSTFQSQVASSF
PSSVASNIYSSPVPTPLSDMQTTLSPRTIEIC
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccaagaccgagatgatcctcccaaccctgcaaatctcagagcctctgagc
ttccctcactcccccatggataactaccccaagctggaggaggtgatgatgctcagctct
gcagggacccccttcctcaccgcctctgcacccgaaggtgcaggctttggctctggagag
ccaggggagcagtacgaccaccttgctggagatacgttacctgatatccccttcaactgt
gagaagtcagtggcggagcaggcctaccaaactcagaagctgccccccatctcttacaca
ggccgcttcactctggagcccgcaacctcctgcagcaacagcctctgggcggagccaatc
ttgggcctgttcactggtctgatgggcaatattccttccagctccacctcttcctctgct
gcctcactgaccatctcgtcctccccttcatccatcccatcctcctccacttcctcctct
tctacctcctcctcatctcagagctccagcctcagttcctccatccaccacagcgagccc
aaccccatctactcagccgccccgacctactccagccccaactctgacatcttcccagat
cagggccagtctttttccaactcagtgggaacagtgcagtaccctcctcctgcctaccct
aatagcaagacctgcagcacaagcttccctgtacccatgattcctgactacctcttccct
cagcagcagggagagatcagccttgtgccccctgaccagaagcccttccagagtcagtca
agccagccctccctcacccctttgtccaccatcaaggccttcgccacccagactggttct
caggacctaaagaacgtctaccagtcccagctgattaagcccagccgcatgcgcaagtac
cccacccggccaagcaagacacctccacatgagaggccctacgcttgccccgtggagacc
tgtgatcgtcgcttctcacgctctgatgagctgacacgccacattcgcatccacacaggc
cagaaacccttccaatgccgcatctgcatgcgcaacttcagccgcagcgaccacctgaca
acacacatccgcactcacactggtgagaagcccttcgcctgcgagatctgtggacgcaag
ttcgcccgcagtgacgagaggaagaggcacacaaagatccacctacggcagaaggacaag
aaagcagagaaggcaggagcagtggtggtaactgcagcgccggtatcggctccctcacct
gcttccagctacccctctcccatcacctcatacccctctccagtgtcttcttacccctct
cccgtcacctcgtgttactcctctcccgttcacacttcctatccatctccttccatcgct
accacctacccatcagtctccatgtccagcacctttcagtcccaggtagcctcttccttc
ccctcttcagttgcctccaacatctacagctcccccgtcccaacccccctatcagacatg
cagaccactctctccccaaggacaatcgagatttgctaa
DBGET
integrated database retrieval system
