Scomber scombrus (Atlantic mackerel): 133986047
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Entry
133986047 CDS
T10651
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133986047 (lingo2)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133986047 (lingo2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_14
Ig_2
LRR_9
V-set
LRR_EndoS
LRR_6
LRR_RPS2
LRR_Zer-1
Sp38
C2-set_2
DUF7617
Receptor_2B4
C2-set_3
Ig_6
Motif
Other DBs
NCBI-GeneID:
133986047
NCBI-ProteinID:
XP_062281805
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All DBs
Position
9:9227145..9228998
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AA seq
613 aa
AA seq
DB search
MVDCMSKVMLHTVVSCWQPFLGLALLAVFVTSALGCPSRCECSAQSKAVVCHRKRMPTIP
DGIPTETRILDLSKNKLTMINPDDFVAFPGLEELDLSGNIISYVEPGAFNALFNMHSLSL
KSNRIKLIPLGVFTGLANLTRLDISDNKIVILLDYMFQDLHNLKFLEVGDNDLVYISHRA
FSGLLSLEILTLERCNLTVVPTEALSHLHNLVSLHLRYLSISTLHPYSFKKLFRLQHLEI
DNWPSLDHVPANTLHGLNLTTLFITNTNLSSFPYQALKHLPYLTHLNLSYNRIRHIEGGM
LMELVRLRELHLVGAQLTAIEPYAFQGLRGLKVLNVSHNRLDTLEKGVFQSPEALEVLLI
DNNPLVCDCRLMWILQKRHSIFFGESQPECSTPEGIRGRPFKEFKETLLSYYVTCTKPKI
RENKTQTITVDEGQQAMLRCSAEGTPRPVVSWLSPRRRVLTSRSHGRVTVHNNGTLEIKS
AEVQDSGVYLCLASNTAGNDTLMTSLAVKSLGSLYANRTQYYTDPSNTTANGTTGVTLGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDVEYVPRSKSNGTNVDSAD
GQAGPRRFNMKMM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggttgactgtatgagcaaagtcatgctgcacacggtcgtctcatgctggcaaccattc
ctgggactggccctcctggctgtctttgtgacttctgccctgggatgtccctcacgctgc
gagtgttcagcgcagagcaaggcagttgtctgtcatcgcaagcgcatgcccaccattcca
gacggcatcccaaccgagaccaggatccttgacctgagtaagaacaagctgacaatgatc
aacccggatgactttgttgcctttccggggcttgaggaacttgacctcagtggaaatatt
atcagttatgttgagcctggagctttcaacgccctgtttaacatgcactcgctcagtctt
aagagcaatcgtatcaagctcattcctcttggcgtcttcacaggcttagcaaatcttact
cggctggatataagtgacaacaagattgtcatcctcctggattacatgttccaggacttg
cacaatctaaaatttttggaagtgggtgacaatgatctggtttacatttctcaccgtgca
ttcagtggactgttaagccttgagatactcaccctggaaaggtgcaaccttactgttgta
cccactgaggctctgtcccacctgcacaacctggttagtctccatcttagatacctcagc
atcagcactttacatccttactcattcaaaaagttgttccggcttcagcatttagaaatt
gataattggccttcactagaccacgtgccagcaaacaccctgcatggcctcaacctgacc
accctgtttataaccaacaccaacttgtcctccttcccttaccaagccctgaagcatctg
ccctacctgacacacctgaacctgtcctacaaccgcatcaggcatattgaaggagggatg
ctaatggaactcgttcggcttcgagagctacatctggttggagctcagctgactgccatt
gaaccgtacgccttccagggcctgcgggggctcaaagtcctcaacgtctctcacaacaga
ctggacacactggagaagggagtatttcaatctcccgaggctctggaggtccttctgatc
gacaacaaccccttagtgtgcgactgtcgtctgatgtggatcttacagaaaaggcactct
atcttctttggtgagtcgcagccagagtgcagtacacctgaaggtattcgcggcaggcct
tttaaggagtttaaagaaactctcctgtcctattatgttacatgcacaaagccaaaaatt
cgtgaaaataaaacacaaacgatcactgtggatgaaggccagcaagcgatgttacgctgc
agtgctgaagggacaccaaggcccgttgtgtcctggttgtccccacgccgacgagttctg
acaagtaggagccatggtcgggttacggtccacaacaacggtacactggagatcaagtca
gcagaggtacaagacagtggtgtgtacctttgccttgcatccaacactgctgggaatgac
accctgatgacttcattggcggtgaaaagtcttggatcgctgtacgctaacaggacccag
tactacacagatcccagcaataccactgccaatgggacaaccggtgtgaccctcggtttg
gacctaaagactattttagtgtcaacagccatgggttgcttcacgttcctgggagtggtc
ttgttttgtttcctgctccttttcgtttggagcagagggaaaggaaaacataaaaacaac
atagatgttgaatatgtgcctcggtcaaagtctaacggcaccaatgttgactcggcagat
ggacaagctggtcctcgtcgttttaacatgaaaatgatgtga
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