Scomber scombrus (Atlantic mackerel): 133986095
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Entry
133986095 CDS
T10651
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor
KO
K05771
glucocorticoid receptor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133986095 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133986095 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssco03310
]
133986095 (nr3c1)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
133986095 (nr3c1)
Nuclear receptors [BR:
ssco03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
133986095 (nr3c1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
GCR
zf-C4
Motif
Other DBs
NCBI-GeneID:
133986095
NCBI-ProteinID:
XP_062281861
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Position
9:21383263..21407845
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AA seq
782 aa
AA seq
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MDKGGVKKITYRRDDHLSKLVYTESSEEGGPLKVAPHSAVSITTTSVVLPSSPLMQPGQV
PNGLSNSPLPEELTSASFTATVGPLQVDPEPRGATKDQRSQQQLLQSSTTFGQTLGENLP
QLEASIADITQSSMDSLIGGSDPNFFAMKTEDFSMDKDQDPIDLDHALEHIGKDVDVNQK
LFSDNTLDLLHDFELTGSPSDFYVGDDAFLSTLADDSLLGDVSSERDIKPAMVESSNGSG
TISVALNGSNMASPDQSSSSISTTASLTPTTTLSTLVKKEKDAGFIQLCTPGVIKQEKTS
AGLSYCQMSGASSTDLPSSSPISICGVSTSGGQSYHFGVSPSSCNDDQQQKDQKPVTNLY
LPVTTIGGVWNRGQSVLDNSAMHRVTEAFSSSPTYPTSFASSASRQEGGIATSSSQGKSG
THKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPAC
RFRKCLMAGMNLEARKTKKLNRLKGVQPSNPPEANPSPPVEARALVPKCMPQLVPTMLSL
LKAIEPDTFYAGYDSTLPDTSTRLMTTLNRLGGRQVISAVKWAKALPGFRNLHLDDQMTL
LQCSWLFLMSFGLGWRSYQQCNGDMLCFAPDLVINEERMKLPYMADQCEQMLKISSEFVR
LQVSHDEYLCMKVLLLLSTVPKDGLKSQAVFEEIRMSYIKELGKAIVKREENSSQNWQRF
YQLTKLLDSMHEMVGGLLSFCFYTFVNKSLSVEFPEMLAEIISNQLPKFKAGSVKPLLFH
QR
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggataaaggtggagtgaagaagataacatatagaagagatgaccatttaagcaagctg
gtctacactgaaagctctgaggagggaggtccgttgaaagtggctcctcacagcgcagtg
tccatcaccaccacctctgtcgtccttccatccagccctttgatgcagccaggacaggtg
cccaacggcctcagcaacagcccccttccagaggagctcacctccgcctccttcactgcc
acagtaggccccttgcaggtagacccagagcccaggggcgcgaccaaagatcagaggtcc
cagcagcagttgctccagtcgtctaccacgtttggtcaaaccctgggggagaatttgccc
cagctggaagccagtatagcagacattacccagtcctccatggattcactcattggggga
tcagatcccaacttttttgccatgaaaacagaagatttctccatggataaagaccaggat
cccatcgacctcgaccatgccttggagcacattgggaaagatgtggatgtcaaccagaaa
ttgttcagtgacaacacactggacctgctccatgattttgagctcaccgggtccccctca
gatttttatgtaggggacgatgccttcctgtctactctggcagatgattctctgcttggc
gatgtgagctcggaaagggacatcaaacctgccatggttgagagcagtaatggcagcggc
acaatctctgttgctctcaatggcagcaatatggcaagtccagatcagtccagctctagc
atatctacaactgccagtttaacacctacaaccactttgtctacgttggtgaagaaagaa
aaggatgctggcttcattcaactctgcaccccaggtgtgatcaaacaggagaagacatct
gcaggcctgagttattgccaaatgagcggtgcgtcctccacagacctgcccagctctagc
cctatctccatctgtggggtcagcacttcaggaggacagagctaccactttggagtcagc
ccgagcagctgcaatgatgatcagcagcagaaggatcaaaagccagtgaccaacctgtat
ctcccagtgacgaccattggcggggtgtggaacagaggccaaagtgttttggacaactca
gcaatgcacagggttactgaggctttctcaagctctcccacctaccccaccagttttgcc
agttccgcttccagacaggaagggggcattgctacatcctcgtcacagggaaagagtggg
actcacaaaatctgcctggtgtgctctgatgaggcttcaggatgccattatggcgtactc
acctgcggcagttgcaaggtcttctttaagagagcagtggaagggcagcataattacctg
tgtgctgggaggaatgactgcatcatagacaagatcaggaggaaaaactgcccagcctgc
cgcttccgcaagtgtctgatggcaggcatgaacctggaagcacgcaaaaccaagaaattg
aatcgcttaaaaggcgtccagccgagcaacccacccgaggctaatccctctccaccagtg
gaggctcgcgctcttgtacccaagtgcatgcctcaacttgtccccacaatgctgtccctg
ctgaaggccatcgagccagacaccttttacgccggctacgacagcaccctgcccgacacc
tccactcgcctcatgaccaccctcaacaggctgggcggccgacaggtcatctctgctgtc
aagtgggccaaggctctgccaggttttaggaacctgcacctggatgaccagatgaccctt
ctgcagtgctcctggctcttcctcatgtctttcggtctgggctggaggtcttaccaacaa
tgcaatggtgacatgctctgtttcgcaccggacctcgttatcaatgaggagcggatgaag
ctgccctacatggccgaccagtgtgagcagatgctgaagatttccagcgagttcgtgcgg
ctgcaggtttcccacgacgagtatctgtgcatgaaggtgctgctgctgctcagcacagtg
ccaaaggacggcctgaaaagtcaggcggtgttcgaagagattcggatgtcgtacatcaag
gagctggggaaggccattgtgaagcgcgaggagaattccagccagaactggcagcgtttc
taccagctcaccaagcttctagactccatgcatgagatggtaggtggactgctcagcttc
tgcttctacacctttgtgaataaatccctgagtgtggagttcccagagatgctggcagaa
atcatcagcaaccagttaccaaaattcaaggccgggagtgtcaaaccactcctgttccac
cagagatga
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