Scomber scombrus (Atlantic mackerel): 133986111
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Entry
133986111 CDS
T10651
Symbol
arhgef6
Name
(RefSeq) rho guanine nucleotide exchange factor 6
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04518
Integrin signaling
ssco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
133986111 (arhgef6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
133986111 (arhgef6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133986111 (arhgef6)
Membrane trafficking [BR:
ssco04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133986111 (arhgef6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
RhoGEF67_u1
SH3_9
CH
PH
SOS1_NGEF_PH
HAUS-augmin3
ZapB
ENTR1
COG6_N
CENP-Q
Motif
Other DBs
NCBI-GeneID:
133986111
NCBI-ProteinID:
XP_062281880
LinkDB
All DBs
Position
9:complement(13443294..13470050)
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AA seq
770 aa
AA seq
DB search
MNPEEQTVTWLISLGVLSSPKKNIADPEEFLKTSLKDGVVLCKLTERLIPGFTPKYCQDP
RTEADCISNIREFLRGCSSLKVEGFEPEWLYSGENFGKVLSTLLAVNFATQDCAAERSCS
QSGASSPSHSTSSHTLSSAKSKGSLRRQSKSVEMSENGGGGQMVKARFNFKQNNEDELSF
NKGDMILVTRQEEGGWWEGSLNGKTGWFPSNYVREIKPCEKPVSPKGTQLTKNYYSVVVQ
DILEHEREFVKELQTVLSCYLRPLQASDKLSSADSATLCGNLEEILTFQQSLCVSLEECT
KVPEGQQRVAGCYLNMMVQIKNLYLAYCSSHPSAVCILTDHSEELDKFMESQGASVPGIL
TLTTSLSKPFMRLDKYPTLLQELERHVEEAHPDFADIVKATAAFRSLVTQCQDLRRRKNL
ELQILSEPVRGWEGDSMKSLGHVAYMSQVHVKNGSSEEKEERYLMLFPNIIVMLSASPRM
SGFIYQGKLPLTGTTVTRHVEEADAHYAFDITGSMIERITVFCSTGQELQEWLEHLQPFT
KGGSPAGTLKTVEGKPLSMVGTSTHLSHLGSLSAISRGPLEPPKISKPWSLSCLRPAPPL
KPSAALGYKERMSYIMKDSSKSPRPMKKFLPGNRKKERKPSDDEIQTRKSTAALEEDAQI
LRVIEAYCTGASLHQTGTAVRKECVPQVLLPDEEKIIVEEMKSNGQTVIEEKSLVDAVYA
LKDEVHELKKENKWMKQFLEEEQKSRKELERVVRKLAKQKNDCTWDDGGH
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaggagcagactgtaacgtggttaatatcactgggagtgctcagctcgcct
aaaaagaatatagcagacccggaggagtttttgaaaacatcgctgaaggatggggttgtt
ctgtgcaagctcacggagcggctcatacctggcttcacacccaagtattgccaggatccg
agaactgaagctgactgcatttccaacatcagggagtttttaagaggatgctcgtctttg
aaagtggaggggtttgaaccagagtggttatactctggtgagaactttggaaaggtcctg
tccactttgctggcagtcaactttgctacacaagactgtgctgctgagaggtcatgttcg
cagtccggtgcctcctctcctagtcattcgacatcctcacacacactctcctctgccaaa
tccaaaggatctctgcgtagacaatccaaatcagtggagatgtctgagaacggtgggggt
gggcagatggtgaaggcccgcttcaatttcaaacagaacaatgaggatgagctgtcgttt
aataaaggtgacatgatccttgtgacgcggcaggaggagggaggctggtgggagggctcg
ctcaacggcaaaacgggttggttccccagtaactacgtccgtgagatcaaaccctgcgag
aaaccagtgtctcctaaaggaactcagctgacaaagaactactacagtgtggtggtacag
gacatcttggaacatgagcgggagtttgtcaaagaattacaaacagtgctaagttgctac
ttacgacccctgcaagccagtgacaagctgagcagtgcagacagcgccaccctgtgtgga
aacctggaggagatccttaccttccagcaaagcctgtgtgtttctttagaggaatgtact
aaagtcccagagggccagcagcgagtggcaggctgctacttaaacatgatggttcagatc
aagaatctgtacctggcttactgctccagtcatccctcagctgtctgcatcctcactgac
cacagtgaggaactagacaaatttatggagagccagggagccagtgtgccagggatcctg
accctgaccacaagtctcagtaagcccttcatgaggctggacaagtacccaacactgctg
caggagttggagagacatgtggaggaagcccatccagactttgctgatatcgtaaaggca
acagctgcatttaggagcctagtgacgcagtgccaggacctgcggaggcgcaagaacctg
gagctccagatcttgtcagaaccagtgcgtggttgggagggagacagcatgaagagcctg
ggtcacgtggcctatatgtcccaggtccatgtgaaaaatgggtccagtgaggaaaaagag
gagcgctacctaatgcttttcccgaatataatagtaatgctctctgccagcccccggatg
agtggctttatttatcagggaaaactgccactgacaggcacaacagtaacaagacatgtg
gaggaagcagatgcccactatgcctttgacatcacaggaagcatgatcgaacgtattaca
gtgttctgcagtactggacaggaattacaggaatggcttgagcaccttcagccctttacc
aaaggaggcagccctgcaggaaccttaaagacagtagaaggcaagccgctgagcatggtt
ggaacctccactcacctatctcacctgggcagcctcagcgccattagtcgtggccccctg
gaaccaccaaaaatcagcaagccgtggtccctcagctgtttgcgtcccgcacctcccctc
aaaccctctgctgcgctgggatacaaagagaggatgtcttatatcatgaaggattccagc
aagagcccgcggcctatgaagaagttcctgccaggcaacaggaagaaagaaaggaaaccc
tctgatgatgagattcaaacaaggaaaagcacggccgcgctggaggaggatgcccagata
ctgcgggtgattgaggcgtactgcacaggagccagcctgcaccagaccggcacagcggtg
cggaaagagtgcgtgcctcaggtgcttctgccagatgaggagaagatcattgtggaggag
atgaagagcaatgggcagacagttattgaagaaaagagcctggttgatgctgtgtatgct
ttaaaggatgaggttcatgaactgaagaaggagaataaatggatgaagcaatttctggag
gaggagcagaagtctcgcaaagagctggagagagtggtcagaaaactggccaagcagaag
aatgattgtacttgggatgacggcggccactga
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