| Entry |
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| Symbol |
polr1a
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| Name |
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
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| KO |
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| Organism |
ssco Scomber scombrus (Atlantic mackerel)
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| Pathway |
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| Brite |
Enzymes [BR:ssco01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133986184 (polr1a)
Transcription machinery [BR:ssco03021]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
133986184 (polr1a)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:26378805..26399851
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| AA seq |
1693 aa
MLFGKDVPWRRMEGMSFGLYSAEEIRKLSVKTITNFRFLDAVGNVAPNSLYDLALGPADN
KEVCSTCCQDFNNCPGHFGHVELPLPVYNPLFFDKLYLLIRGSCLSCHMLTCPRAAIHLL
INQIKLVDHGAMQEVYQAEQVLNRILEENAKATGDEIEQGLKEFTDSIVGANASENSKPI
KHLVEKKSSLINDFWRIHMKTRKCPYCRRGRFTVRREHNSKLIVTMPSGAKTDGNTDEDL
MAGKRVYLTASTAREHSNKLWEKEGFFLKRLFSGLEEGSGFAEGESVYYPDLFFLELMVV
PPCRYRPINRLGDQMFTNGQTVNMQAVMKDCGVIRKLLALIAGEKTTEEEEAPEQTDQSF
LSGIPGVSLTDKLYNIWIRLQTHVNIVFDSDMDKMMTEKFPGIRQILEKKDGLFRKHMMG
KRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVHPGA
SMVINEDGRRTILSATNPAQREAVAKQLLTPCSGVQKMPMKIVNRHIKNGDVLLLNRQPT
LHRPSIQAHNARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELARAEAYTLVSTD
QQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFTRDQYHELVYRGLTDKPGRVKLLPPAI
FKPQCLWTGKQLVSTLLLNVIPDNAVPLNLVGKSKIPSKAWIQEPPRLAPGYKPESMCDS
QVVIRQGELLVGVLDKAHYGSSVYGLVHCCYELYGGGTSGKLLSCLARLFTAYLQLYRGF
TLGVEDILVKPGANRRRKKIIQDSLKIGTKALQAAFNMPSNVDQAEAQSRWQDAHLNPDQ
RDFSLADHKFKEVANQVNNEINKVCMPVGLHTSFPDNNLQLMVQSGAKGSTVNTMQISCL
LGQIELEGRRPPLMPSGKSLPCFQPYDPAPGAGGFVSGRFLTGIKPQEFFFHCMAGREGL
VDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPR
QFPFIEDNYEVINRSQGLDEVLARLDPRTANKHFTAIQRWKAKRELACPRRGAFLSFSQK
KLAKLKPTAEPDAAKLQLIEQWHSLDEASRSKYSKKSSRCPEPSLGLLRPDVCFGSVSEN
FYNITEKYLQSRTDEDSLDTHSLRQLLHYKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLN
TFHFAGRGEMNVTLGIPRLREILMVAGSNIKTPMMSVPVLNTKKALKRAKTLRKKLSRVC
LAEVLQKVDVVETLRIEGVSHQKVRTFKVTFHFLPPERYCEDKLLSPNQILHYMETRFFR
LLLEGIKKRSAKLASIAVETRKATLRDKDYDGEGTADTAGAEDGEGEEERVIVDDQGNEG
DADASDAKRKDKQEEEVDYESEEEGDDGGEDKEDAGEEEEETQDVESRNAESSNLEESQP
ELAGLTTEKKRKRVKKTGGGGGEGEGEGSLSQMRVNAVLDSNPAIERYCYDNQHELWCEV
DLVLPVSKVHFDLTSVLSTLAQNAVIMETKGLTRCLLSENTTKTGEKQMVLNTEGINMHE
MFKHSDILDINRLHSNEVHAMANTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADY
MCFEGVYKPLNRHAIRSNSSPLQQMTFETSYKFLKQATMLGSHDELVSPSACLVVGKVVK
GGTGLFELKQPLQ |
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| NT seq |
5082 nt +upstreamnt +downstreamnt
atgttgtttggaaaagatgtgccatggcggcgcatggagggcatgtcgtttggcctttat
tcagccgaagagataagaaagttgagcgtgaagacgatcaccaacttcaggttcctcgac
gctgttgggaatgtggccccaaacagcctgtacgatctggccctgggaccagcagacaac
aaagaggtgtgttcaacctgctgtcaggacttcaacaactgtccgggacattttggacac
gtagagctacctctgcctgtgtacaatccactgttttttgataaactctacttgttgatt
cgtggctcgtgtctgtcgtgtcacatgctaacatgtccccgagctgccatccacctgctg
ataaatcagattaagttagtggaccacggagccatgcaggaggtctaccaagcagagcaa
gttctcaaccggatcctggaggagaatgccaaagccactggagatgagattgagcagggg
ctgaaggagttcacagattcaatagttggagcaaacgcttcagagaacagcaaaccgatt
aaacacctggttgaaaagaagagcagtctgataaacgacttctggagaatccacatgaaa
accaggaagtgtccttactgcaggcgcgggcggtttacagtacgtcgtgaacacaacagt
aaactaattgtcacgatgccatcaggagcaaaaactgatggtaatactgacgaggatctg
atggctggaaagagagtctacctgacagccagtacagccagggaacacagcaacaaactc
tgggagaaagaaggtttcttcctcaagcgtctgttctccgggttggaggagggctcgggg
ttcgcggagggagaaagcgtttactatccggacctcttcttcctggagctgatggtggtc
ccaccttgcaggtatcgtccaatcaatcgactgggcgaccagatgttcactaacggacag
acggtcaacatgcaggctgtcatgaaggactgcggagtcataaggaaacttctggctctt
atagcgggcgagaaaaccactgaggaggaagaggctcctgaacaaacagaccagtcattt
ctgtctgggattccaggtgtgtcattaacagataaactctacaacatctggattcgcctc
caaactcacgttaacatcgtcttcgacagcgacatggacaaaatgatgacagagaaattc
ccaggaatcagacagatcctggagaagaaggacggattgttccggaaacacatgatgggc
aaacgagtggactacgctgcacgatctgtcatctgtccagacatgtacatcgggaccaac
gagataggaatacctatggtgtttgccaccaaactgacctacccgcagccggtcactcca
tggaacgtgaaggagcttcgtcaggccgtccttaacgggcctaacgtccatcccggtgct
tccatggtgataaacgaggatggcaggagaaccatcctatctgccaccaatcctgcacag
agagaagcggttgccaagcaactgctgacgccctgttcaggtgtccagaagatgcccatg
aagatagtaaatcgacatattaagaacggagatgttttgttactaaacagacagccaact
ctgcacagaccctcaatacaggcccacaacgctcgcatcttacctggagagaaggtacta
agactccactacgccaactgcaaagcttacaacgccgactttgacggagatgagatgaac
gctcacttccctcagagcgagttagccagagccgaggcctacacgttagtcagcactgac
cagcagtacctcgtccccaaggatggtaaacctttggcaggtctgatccaggaccacatg
gtgtcgggtacgcggatgaccatacgaggctgtttcttcaccagggaccagtaccacgag
ctggtgtacagaggactgactgacaaaccaggcagagttaaactgctgccaccggccata
tttaaaccacagtgtctatggacagggaagcagttggtgtccaccctcctgctcaatgtc
atcccagacaatgcagtgcctctcaacctggtgggcaaatcaaaaatccccagcaaagca
tggatccaagaaccaccacgactcgctccaggatacaaacctgagagcatgtgtgactca
caggtggtgattcgtcagggggagctgttagtaggtgttctggacaaagctcactacggt
tcctcagtctacggtctggtccactgctgctatgagctgtacggaggggggaccagcggc
aaactgctcagctgtctggcccgactcttcaccgcctacctgcagctatacagaggcttc
actctgggtgtggaggacatcctggtgaaaccgggtgccaaccggcggaggaaaaaaatt
atccaagattcactgaagattggcaccaaagccctccaggcagcgttcaacatgccttcc
aacgtggatcaggctgaggctcagagccgctggcaggacgctcacctcaaccccgaccag
agagacttcagcctggctgaccacaagttcaaggaagtggccaaccaagtgaacaacgaa
attaacaaggtgtgtatgccagtcggcctccacacctctttcccagacaacaacctccag
ctgatggtccaatcaggagccaagggttctacagttaacaccatgcagatctcatgtcta
ctgggtcagatcgaattggaaggccgtagacctccactgatgccttctgggaagtcattg
ccgtgtttccagccatatgacccggcgcctggtgctgggggcttcgtttctggaaggttc
ctcacaggcatcaaaccacaggagtttttcttccactgtatggctggcagagaaggactg
gtggacacagctgtgaaaacatctagatcaggatacctgcagagatgtgttatcaagcat
ctggagggtttggtagtacagtatgatcttacggtgagggacagcgacggatctgtggtc
cagttcctgtacggtgaggacggcctggatatccccaagactcagttcctgcagccgaga
cagttccccttcatagaggataactacgaggttatcaacaggtctcagggtctggatgaa
gttttggcacgtttggaccctcggaccgccaataaacattttacggccatccagcgctgg
aaagcaaagagagagttggcctgtccacggagaggagcgttcctgtcattttcccagaag
aagttggctaaactaaaaccgacagcggagccagatgccgctaaactacagctgatagag
cagtggcattctctggatgaagccagcaggtcaaaatacagcaagaaatcctcccgctgc
cccgagccctctctgggcttgttaagacctgacgtctgcttcggatcagtgtctgaaaac
ttttataacatcacagagaaatatctgcagagcaggacagatgaagacagcctggacaca
cacagccttcgccagctgctgcactacaaatggcagcgttcactgtgtgaccccggggaa
gctgtgggtctgctggcagcccagtccatcggtgagccctccacccaaatgaccctcaac
accttccactttgccggcagaggagagatgaacgtcactctgggaatacctcgactgaga
gagatcctgatggtggccggctccaacatcaagactcccatgatgagcgttccagtgctg
aacaccaagaaggctttaaagagagcaaagacgctccgcaagaagctctccagggtttgt
ctggccgaggtgctgcagaaagttgatgttgtggagactttgcggatcgagggcgtctct
caccaaaaggtacggacgttcaaagtcaccttccacttcctgcctcctgaacgttactgt
gaggataagctgctgtcgcctaatcagatcctccactacatggaaactaggtttttccgt
cttctcttggaaggcattaagaagcgcagcgccaaactggcatccatcgctgtggagacg
aggaaggccacccttagggataaagactatgatggcgaaggaacggctgacacagcaggg
gcagaggatggagagggagaagaggagagagtgatcgtggatgaccaggggaacgaagga
gacgctgacgcatcagacgccaagcgaaaagacaaacaggaagaggaggtggactatgag
agtgaggaggaaggagatgacggtggcgaagataaagaagacgctggggaggaagaagag
gagacgcaggatgtggagagcaggaacgcggagagcagcaatctggaggagtcccagcca
gagttagcaggattgacaacggagaagaaaaggaagcgagtgaagaaaacggggggagga
gggggagaaggagaaggagaaggctccttgagtcagatgagagtgaatgcggttctggat
tccaacccggcaatagagagatactgttacgataaccagcatgaactctggtgtgaggtc
gacctggtgttgcctgtgagcaaggtgcacttcgacctcacctcagtcctgtcgacgctg
gcacagaacgccgtcatcatggaaaccaagggcctgactcgctgcctactgagcgagaac
acgacgaagaccggagaaaaacagatggtcctcaacacggaggggatcaacatgcacgaa
atgttcaaacacagtgatatcttggacatcaacaggctgcactccaatgaagtccatgcc
atggcgaacacctacgggattgaagtggctttgaaggttatagaaaaggagatcaaagat
gtttttgcggtctatggtatcgaggtggatcccaggcacctgtcgctggtagcagattac
atgtgcttcgaaggcgtatacaagccattaaaccgacacgcaatccggtccaattcctcc
cctctgcagcaaatgacgtttgagacgagctacaaattcctcaaacaggccaccatgctg
ggatcacatgatgagctggtgtcaccctctgcctgcctggtggtggggaaggtagtgaaa
ggtggaacaggactatttgaactcaaacaacctctgcagtaa |
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