Scomber scombrus (Atlantic mackerel): 133986188
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Entry
133986188 CDS
T10651
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133986188 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133986188 (neil3)
Enzymes [BR:
ssco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
133986188 (neil3)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133986188 (neil3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Fapy_DNA_glyco
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
133986188
NCBI-ProteinID:
XP_062281976
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Position
9:8219200..8228224
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AA seq
579 aa
AA seq
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MVEGPGCTLNGEKIRSKVHKGQKMKEIRGSLTRNNSEGNAFQSLCGCPYTGVETLGKELF
MYFGSRALRVHFGMNGSMRINPAERKDRNASIPVLEIQLTNDIVSFFDSTAEIRLTEDCE
QRVRAMQSLDVCSSKFSFPRSEEAVRSQSSRMLCDVLLDQTVMPGVGNIIKNEALFDSGL
HPAVKVQQLTDQHLHHLVKMTRDFTLLFYKCRKSGSPLYKHYKVYKRPQCCQCFHVITAC
RLGDNSRMTYFCERCQKGDPSGVDVSTLPKRNSLIGWAYNEGTNDNVAKREEEDWACQLC
TLINLPAAKACDACFTPRPEVQKDNISTEASPFTADLMKYPCTAFKKPQEELKVNWRSAF
GTSTLVFSDLSKKPKRVNSPLSLAGSHLNSLASERSLYKYNVCQGTTSPNYASGGWQKQS
AELSNGESLASYSHPSKKMRIDHSPFPSNNAQNGTPNSGMHKIETTRGSSSLSSSPSAPC
CESHRRPAVLRVVHKEGENKGRQFYACSLPRETKCNFFEWADLSFPFCHHGKRCLMRTVL
KLGPNNGRNFYTCGFKKGKQCDFFQWAENGPGISNLPGC
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggtcctgggtgtacattaaacggagagaaaatccgctcaaaagtccacaaa
ggacagaaaatgaaagagatcagaggaagcttgacgagaaacaactccgagggaaatgcc
tttcagagcttgtgtggctgtccgtacacaggtgttgaaaccttagggaaggagctcttc
atgtactttggctcaagagctttgagagtccactttggtatgaatggatcaatgcgaata
aaccccgctgagaggaaggacaggaatgcctcaatcccagtgctggaaatccaactgact
aacgacattgtgagcttctttgacagcactgcggaaataaggttgacagaggactgtgag
cagagggtgagagctatgcagagtctggatgtgtgctcttccaagttcagcttcccccgt
tctgaggaggcagtgaggagccaaagtagcaggatgctctgtgacgttctcctagatcag
accgtcatgccgggagtaggcaacatcattaaaaacgaagccctgtttgactcgggcctt
cacccagctgtgaaggttcagcagctgacagaccaacacctccaccacttggtgaagatg
acacgtgatttcactcttctgttttacaagtgtcgcaaatctggctcccctctctacaaa
cattacaaagtctacaagcgtccccagtgctgccagtgctttcatgtcatcacagcttgt
cgtcttggagacaacagcaggatgacttacttctgtgagcgctgtcagaagggagatccc
agcggggttgacgtcagtacactccccaaaaggaacagtctgattggctgggcatacaat
gagggaaccaatgacaatgtggctaagagggaggaagaggactgggcctgtcaactctgc
acactcatcaacctgccagcagcaaaagcctgtgatgcctgtttcactcccagacctgag
gtccaaaaagacaacattagcactgaagcatctcccttcactgctgatttgatgaaatac
ccctgcactgcctttaagaaaccacaagaggagctgaaagtcaactggaggtctgcattt
gggacttcaacccttgttttctctgacttgagcaagaagccaaagcgtgtaaactcccca
ctctctctagccggcagtcatttgaattccttggcgtcagagcgaagtttatataaatac
aacgtctgccaagggacaacaagccccaattatgcctctggtggctggcagaagcaaagt
gctgagctctccaatggggaatcactggcctcctacagtcacccatccaagaaaatgaga
attgatcacagtccctttcccagtaacaatgctcaaaatggaacccccaattcaggtatg
cacaaaatagaaacgacaagaggcagctcctccctttcttccagtcccagtgccccttgt
tgtgaatcccatcgtcgtccagctgtcctcagagtggtccacaaggagggcgagaataag
ggacgacagttctatgcctgctcacttcccagagagacgaagtgtaatttctttgagtgg
gctgacttaagcttccctttttgtcaccatgggaaacgatgtttaatgaggacggtgctg
aaactaggacccaacaacggccggaatttctacacctgcggctttaaaaagggtaaacag
tgtgactttttccagtgggcagagaacggaccggggatatcaaacctgcctggctgttaa
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