Scomber scombrus (Atlantic mackerel): 133986198
Help
Entry
133986198 CDS
T10651
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133986198 (rlim)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133986198 (rlim)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133986198 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133986198
NCBI-ProteinID:
XP_062281987
LinkDB
All DBs
Position
9:complement(21111153..21118233)
Genome browser
AA seq
667 aa
AA seq
DB search
MEGSDSVEQGGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELLHRLQQIKDGPEQQNNTPRTESAEEPGEQPESSEDPAGGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQGAAEGEQESPEGQAAAAAAAA
AAAAAAAAAAAALADANPNPNPNPNPEPQVPMETEVVEEPVVEELAVIVEPEPELEEVVS
QEILPEPPSSPAVLPVQPTLPPSPRRGQRRPRSRSPEPRRTRARTARSRSPLNLDQLEDL
PNPRHAPSSQGPSSDTNAPPVPPVEGSSRTRQHVLSRQSTADSDAQQSRAGAESVPEAQN
VRPQEGETAGGEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLY
ESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGEL
GYLMDSDSDSSDSNRGASTPADLTETLNNPDATTAPTPAAEVEEPPVAAGVRARTVETDM
DEGLATAPPASGGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLS
MRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVS
ANRESVV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgatagtgtagagcaaggcggcagtgaccagccagagtcacagcgcaga
aggcagctggaccgcctggacagagaggaggccttctatcaatttgtcaacaatctcagt
gatgaggattatcgtctcatgagagacaacaatcttttgggcaccccaggagaggtaaca
gaggatgaactgttacatagacttcagcaaatcaaagatggtcccgaacaacagaataat
acccccaggactgaaagtgcagaggaaccaggtgaacaaccggaaagctctgaggatcct
gctggtggggatagtctcctggactggctgaacacagtgaggcgcacaggcaatacaacc
agaactggtcatcgtgggaaccagtcgtggcgggcagtaagccagaccaacccaaacagt
ggagattttcgcttcagcctggaaatcagtgtgaaccgcaacctggctgaacagcaggga
gctgctgaaggagagcaggagtctccagagggtcaagcagcagcagcagcagcagcagcg
gcggcagcagcagcggcggcagcagcagcggcagcgcttgcagatgcaaatccaaatcct
aatcctaatcctaatcctgaaccacaggtccctatggagacagaagtggttgaagaacca
gttgtagaggagctggctgtcatagtggaaccagagcctgaattagaagaggttgtttca
caggagatactgccagaaccccccagctcaccagctgtccttccagtgcaacccacactt
cctccttctccacgcagaggacaaaggagacctcgcagccgcagtccagaaccacgcagg
accagggctcgtacagccagaagtcgctctcctctcaacctagatcagctggaggatctc
cctaatccacgtcacgctcccagctcgcaaggccccagctctgacaccaacgctcctcct
gtgcctccagtggagggcagttctcggactcgacaacatgttctgtccaggcaaagcact
gctgacagtgatgctcagcagtctagggctggagcagaatcagtcccagaggcccaaaac
gtcagacctcaggaaggagaaactgctggaggggaagggggtgcagctggacgccgcccc
cctactatcatgcttgatctccaggtgcgtcgtgtgcgtccaggcgaatatcgccaaaga
gacagcatcgccagtcgcacccgctcacgctcccagaactcaaacaacacatttctttat
gaaagtgagcgcggtggatttcgtaggactttctcacgctcagagcgtgccggtgtgagg
acctacgtcagcactattcgcatccctatccggagaatctctgatgcaggtttgggagag
gcaacctcaatggctctccagtctatgatccggcagatcatgacaggctttggtgaactc
ggatacctcatggattcagactctgactcttcagattcaaaccgtggagccagcacacct
gcggatctcactgagaccctgaacaacccagatgctaccactgctccgactcctgctgct
gaggttgaggaaccacctgtagctgctggagtcagggcaaggacagttgagactgatatg
gatgagggccttgccactgctccacctgcctctggtggtagggctcgacctagacctcct
atcagcttagaagagcccagctcactgcccttcctccgacttgcccacttcttcctccta
aatgatgatgatgaggaccagccccaagggctgaccaaagagcagattgacaacctctct
atgcgcaactttggtgagagtgatgccttgaagacttgcagtgtctgcataacagagtat
gcagaaggaaataagctacgtaagctgccctgttctcatgagtaccatgtgcactgcatt
gatcgctggctgtctgaaaactccacttgccctatctgccgcagggcagtcctggtgtct
gccaaccgagagagtgtggtttag
DBGET
integrated database retrieval system
