Scomber scombrus (Atlantic mackerel): 133986209
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Entry
133986209 CDS
T10651
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133986209 (npas4a)
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Other DBs
NCBI-GeneID:
133986209
NCBI-ProteinID:
XP_062282001
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Position
9:complement(14302230..14306214)
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AA seq
936 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISEADKARLSYLHIMSLACMYTRKSVFFTQEA
GTAAGVEESAQFLSFYELSEFMQTLPGFLMLLTGEGKLLYLSESVTEHLGHSMVDLVAQG
DSVYDIIDTSDHLIMRTNLSTSTSLETDRLFRCRFNTSKSVRRQSAGNKLVLIRARCLIP
PLSAPTAGSYWTSNPVWVCFCSPLEPHPTRTGPGAERESTSTPPLTDTNLFLACFHSQHG
RDLRLQTAQDSVSAYLGFDVTALRSCSWYSLLHPQDLSHASAQHRSLLREGGEGRAEMVV
RVQAQDQSWVWLYMVLQLQPGEFPISSNNYIISESEAWSVRQQLSSEQTQLTLVLSSGTS
QQESLSLQSPETLSSPDQVFTPGSSGLSAQSFDFSTAGCSVGSSDEPGSSAAEAMRLEGD
PRSSISSLEEESLFQQHPTESPSAASSPTPVTVETVADLDFLTQNILLPPSFQLDPPLPA
LPLPLPPVPTPQAQQSKEFVCTPPYTPQIGGASFPFGEPLFSFDPTGTTTPPPSATTATA
TTSVAPAASSTAPPTTASSPSPPTTLSTKLALALPNLTTDLLFPIDPCSGSLYEKLPPTP
DSPGDGDCTVMTLPEVRGPLYVDVPLRPLQCPPEGLLTPEASPGKQPCLSFFSLEREREK
ERAEISLLAQHISSLAEGFYLDPLLSKVSPSSMSPSSSPPSPFLSPAIETTDVDSVHMLR
EFYPIKAWRGLDIPMFLDDDDSLFEESILETLIQDDFAPPQSSIISSPSPSSSPMPSPSS
PISPQTPVYWLQPSQFEGVGHFCSVQSAQCNSMAGCGANVAAEAGAMAEGEGLAEEAMEI
EVVSSPVSSCSSIPASPPLILTASQSPATSTPIASPMPTVSCTQSLLEELAVLEPMFGAG
ASIAPGLGQQPELYQLQCHPSPQCFHKDGSGSVPPF
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctcaaccaaaggagcatccaaggctcgacgggaccagatcaacgctgagatc
cggaacctgaaggacttgttgcccatatccgaagcagataaagcgcggctctcatacctg
cacatcatgtctcttgcctgcatgtacaccaggaaatccgtcttttttactcaagaagcg
ggaactgctgctggtgttgaggagagtgcacagtttctgtctttctacgaactgtcggag
tttatgcagacgctgccggggtttctgatgctgctgaccggggaagggaagctcctgtac
ctgtcagagagcgtcaccgagcacctcggacactccatggtggatcttgtggcacaggga
gacagtgtgtatgatataatcgacacctcagaccacttaatcatgaggaccaacctgtca
acctctacatcacttgaaacagatcgtctcttccgctgtcgtttcaacacctccaagtcc
gtgcggaggcagagtgctgggaacaagctggttctgatccgagctcgctgcctcatcccc
cccttatccgctcctactgccgggtcatactggacctccaaccctgtctgggtgtgtttc
tgttctcctctggagccccacccgacccgcaccggccccggggcagagagggagtcaacc
tctacccctcccctgactgacaccaacttgttcctggcctgtttccactcgcagcacggc
cgggacttgaggctgcagactgcccaggatagtgtgagcgcctatcttggctttgatgtg
acagctttacgctcttgctcctggtacagcctcctccacccacaggatctgtcacatgcc
tctgctcagcatcgcagcctattgagagaaggaggagagggcagagctgaaatggtggtg
cgtgtgcaagctcaagaccagtcgtgggtttggctctacatggtgctccagctgcagcct
ggagaattccccatcagcagcaacaactacatcatcagtgagtctgaggcttggtcagtg
cgtcagcagctcagctcagagcagacccagctgaccctggttctgagttccggtacctcc
caacaggaaagtctgagcctccagtccccagaaaccctgtccagcccagaccaggtcttc
acccctggcagcagcggcctatctgcccagtcctttgacttcagtactgctggctgcagc
gttggctcctctgatgaaccaggaagctctgctgctgaagccatgaggctggagggtgac
cctcgctccagtatctcctctctggaggaagaaagcttatttcagcagcatcccactgaa
agcccctcagctgcctcctctcccactccagtcactgttgaaacagtagcagacttagac
tttttaacccagaacattctcctgccaccctccttccagctcgaccctccactgccagct
ctccccctgcctctccctcctgtgcccaccccacaagctcagcagagcaaagagtttgtg
tgcacaccaccctacacaccacagatcggtggggctagcttcccatttggtgaacccctc
ttcagctttgaccccaccggtacaaccactcctcctccctctgctaccacagcaactgcc
accacctccgtggcccccgcagcttcctccacagccccaccaactaccgcttccagccct
tctccccccaccaccctgtctaccaaactcgccctcgcactaccaaacctcaccactgac
ctcctcttccctattgacccctgcagtggctctctttatgagaaattgccccctacacct
gacagccctggagatggtgactgcacagtgatgacccttcccgaggtacggggtcctctg
tatgtagatgtgccactaaggcccctccagtgtccccctgagggcctcctcacccctgaa
gcatcacctggtaaacagccctgcctctccttcttctccctagaacgagagagggagaag
gagagggcagaaatctccctcttagctcagcatatcagctcactggcagagggattctac
ctggatccactcttgtccaaagtctctccttcctccatgtcaccctcatcctcccctccc
tcccccttcctgtctcctgccatagagaccactgatgttgattcagtccacatgcttagg
gagttttatcccatcaaagcatggagaggtctggacattcccatgttcctcgatgatgat
gactctctgtttgaagagagcatcctagaaaccctcatccaagacgactttgctcctccc
cagtcctccatcatctcctccccgtccccctcatcctccccgatgcccagtccctccagc
ccaatctctcctcaaaccccagtgtactggctccaaccctcccagtttgagggagtgggc
cacttctgtagcgtccaatcggcgcaatgtaactccatggctgggtgcggggcgaatgtg
gctgctgaggccggggcaatggcggaaggggaggggctagcggaggaagcaatggagatt
gaggtggtgtcatctcctgtgtcctcttgctcctccatcccagcttcccctcccctcatt
ctcactgcctcccaaagccctgccacctccacgcccatcgcctcgcccatgcccaccgtg
tcttgcactcagtccctcctggaggaactggccgttctggaacccatgtttggggcaggt
gcctcgatcgcccctggcttagggcaacaacctgagttgtatcaactccaatgtcatcca
tcgccacagtgcttccataaagatgggagtggaagtgttcctccgttctaa
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