Scomber scombrus (Atlantic mackerel): 133986226
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Entry
133986226 CDS
T10651
Symbol
rnf44
Name
(RefSeq) RING finger protein 44 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133986226 (rnf44)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133986226 (rnf44)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133986226 (rnf44)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
VPS18_RING_C
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
133986226
NCBI-ProteinID:
XP_062282021
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All DBs
Position
9:22070243..22081030
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AA seq
440 aa
AA seq
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MRPWEIAVNRLPPTAPLNPRRFLGEPCNAPVHLRRSPPVRRQWGRRDRPVLHTSLVQDEN
FHHLLFSQHHQQVPLDESRQYSHTSTPPRMLHPAAHMPQQSPIMVDLHDQMHQGSVPISY
TVTTVTTHGFPIHTGQPLPGCNTQQLPACSVMFSGQLSLLCCLPPPLIQACTMQHMPVSY
QAFPPLISSEHFVLHPTPSVPPHQPPHLTPLSQFVPLQPQHPRMPLQRVENEVDLRGDQH
PLGTFSYPPSHHPPALPPSLPLQYLPQEPLHQELSFGVPYPHMLPRRVSGQRYRLQQPLP
PPPPPPSYYPGFLPYFLSMLPVPPTAVGPAISLDLDVDDVEMENYEALLNLAERLGEAKP
RGLTKADIEQLPSYRFNSENHLSEQTLCVVCFSDFECRQLLRVLPCNHEFHAKCVDKWLK
TNRTCPICRADASDVHREVE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggaaatagcagtaaataggctgccaccaacagcccccttaaacccgagg
aggttccttggagagccctgtaacgctccagtgcatctcaggagaagcccaccagtgaga
cgccagtgggggagacgagacagacctgtactgcacacttctctggtccaggatgagaac
ttccatcatctgcttttctcccaacatcaccaacaggttcctttagatgagtccagacaa
tatagccacaccagcacaccaccacgcatgcttcaccctgctgctcacatgcctcagcag
agccccatcatggtggatctacacgaccagatgcaccagggatcggttccaatatcatac
actgttacgacggtgacgacccacggatttcctatccacaccgggcagcccctgccaggg
tgcaacactcagcagctcccagcatgctcggtaatgttcagcggacagctctctctgctc
tgctgccttcctcctcctcttatacaggcatgtaccatgcagcatatgccagtgtcttat
caagcctttccacccctgatctccagcgaacattttgtattgcacccgaccccatctgta
cccccccaccagccgccgcaccttactcctttgagccagtttgtccctttacagcctcag
cacccacgcatgcctctacagagggtagagaatgaagttgacctaagaggggaccagcac
ccattagggactttctcctaccctccgtctcatcacccaccagcgctgcctccttctttg
cccctacagtatcttcctcaagagcctctgcatcaggagctttccttcggagtgccatat
ccccacatgctgccccggcgagtgagtggacaaagataccggttacagcaacctctcccc
cctcctccaccccccccatcttactacccaggcttcctcccttacttcctgtcaatgctt
cctgtgcctccaacagcagttggcccagccatcagtctagacctggatgtggatgatgtg
gagatggagaactatgaggcattactgaatctggcagagaggttgggtgaagcaaaaccc
cgtggactcactaaggctgatatagagcaacttccgtcctatagattcaactcagagaat
catctatctgaacaaacgctgtgtgttgtgtgctttagtgactttgagtgtaggcagcta
cttcgggtattaccttgtaaccacgaattccacgctaagtgtgtggataaatggttaaag
accaatcgcacttgtcccatctgccgagccgatgcctcggatgtacaccgggaggtggag
tga
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