KEGG   Scomber scombrus (Atlantic mackerel): 133986245
Entry
133986245         CDS       T10651                                 
Symbol
wu:fb13g09
Name
(RefSeq) ATP-binding cassette sub-family C member 5
  KO
K05668  ATP-binding cassette, subfamily C (CFTR/MRP), member 5
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco02010  ABC transporters
ssco04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    133986245 (wu:fb13g09)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    133986245 (wu:fb13g09)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ssco02000]
    133986245 (wu:fb13g09)
Transporters [BR:ssco02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    133986245 (wu:fb13g09)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_29 nSTAND1 Dynamin_N DUF87
Other DBs
NCBI-GeneID: 133986245
NCBI-ProteinID: XP_062282045
LinkDB
Position
9:complement(11309893..11336281)
AA seq 1397 aa
MFPDALEAAGRVEGLPLSSPQPLPELEEEEAEVSSEKGPKRRGRYRKSLQLLKPFRITHK
HQHPVDNAGLFSFMTLHWLSPLALKAYKTSSLSIDDVWGLSCHEASEINCQRLESLWHDE
LKKRGREGASLTRVFWRFCQTRMLVAIFSLLLTMLAGFVGPALLVRALLEYAQMSESCVP
YGLSLVAGIFLLELMRSWSLALMWAVNYRTAARLRGAVLTCAFHKILRLRSTKDISSGEL
INMCSSDGQRLYEAVSVGCLLAGGPLVGILGLSYTAYFLGPTALLGSAIFIIFYPAMMLA
SRLTAYFRKKCVSVTDRRVRLMNEILGCIKFIKMYCWEDAFAQNINKVRSEERGILEQAG
VIQSFTVGVAPIVVVIASVCTFTLHMTIGYDLTAAEAFTVVAVFNSMTFALKVTPLAVRS
LSEGAVASKRFQRLFMMDDRESVLIKLEDPSNAVEFRDATLAWEKARPPAAKPNSPPKKQ
FNRGGMKRVLRREKLSLYISTEDGKGIKEGPNAQSLLTNMEQESPQSTISSTQSIRPPLH
KTLHRIDLRIKRGALVGICGGVGSGKSSLLSALLGQMTRLEGSVAASGGFAFVSQQAWIL
NESLKENILFGKEYDEDKYNAVLEACCLLPDLPELPYGDMTEIGERGANLSGGQRQRVSM
ARALYSERPILLLDDPLSAVDACVGSHVFNKAIRGAAKGKTVLFVTHQLQYLSECDDIIL
MKDGQIAEHGTHAQLMGKERDYATLFNSMQQENLVKENLKNKQQKAGAEKADSVVKVAKV
ASEVESKKGGQLMKAEEKGSGAVAWSVYRAYIKAAGGPIVFIINTFFFLSTTGCIAFCNW
WLSHWIRQGSGNTSLILVNETMESNSMRLNPHIRYYSTVYVISMAAALLLKTIRGLVFVK
CTVKAASVLHDKLFRRLLLSPMHFFDTTPLGRILTRFSRDMDEVDVRLTMQAEMLLQNLT
LVLFCLGMVGIIFPWFLVSILPLLVFLFIVNRVSRVLIRELKRLENISQSPFTSHITSSL
QGLSTIHAYGRGHDFLQRYQELLDTNQASNYLFSCAMRWLAVRLDLISISLITGVALLIV
FMHKQIPPAYAGLAISYAVQLTGLFQFTVRLLTETEARFTSVERINHYIKFLESEAPRKS
PEAATPAPSWPQQGKITFQDVEMRYRDNLPLVLKKLSFTILPEETIGIVGRTGSGKSSLG
VALFRLVELTGGSIIIDGINIAQIGLDDLRSKLAIIPQEPVLFIGTVRTNLDPWDQYTDS
QIWDALEKTHIKEMVSQLPHSLHSEVTENGENFSVGERQLLCVARALLRNSKILILDEAT
AATDTETDRLIQETIRCEFGSCTTLIIAHRLNTVMNCSRVMVLDNGQILEFDSPTALLAD
ENSRFRAMIEASENQRR
NT seq 4194 nt   +upstreamnt  +downstreamnt
atgtttcctgatgcgctggaagcagccgggcgggtggagggcctgccactgtcctcccca
caaccactaccagagctagaagaagaggaagcagaggtatcgtcggaaaaggggccaaag
agacgaggccgctatcggaaaagcctgcagcttttaaagcccttcaggataacacacaaa
caccagcacccagtcgataacgctggcctcttctcatttatgactctgcactggctatcc
ccgctggcgctgaaggcctacaagacgtccagcttgtctatcgatgacgtgtggggactg
tcttgccacgaagcctctgaaatcaactgccaaaggctcgaatcattgtggcacgatgaa
ctgaagaagcgagggcgagagggggcatccctgacaagagtcttttggaggttctgccaa
acccgcatgctggtggccatcttttccctgctcctcacaatgctggcaggctttgttggg
cccgctctcctggttcgagctctgctggaatacgcccagatgtctgaaagctgtgtgccg
tacggcctgtctctggtagccgggatcttcctcttggaactcatgcgctcatggtctttg
gcgctcatgtgggccgtcaactaccgcactgcagcacgcctccgtggggcagttcttact
tgtgccttccacaagatcctccgcctgcgcagcactaaagacatcagttcaggcgagttg
atcaacatgtgctccagtgatggccagcggctgtatgaagcagtgtcagtgggctgtctg
ctggctggagggcctctggtgggaatactgggtctttcctacactgcgtacttccttggt
cccactgccctgctggggtcagccattttcatcatcttctaccctgccatgatgcttgca
tcgaggctgacggcgtatttccgcaagaaatgtgtgtcagtgactgaccggcgcgtgagg
cttatgaacgagatcttgggctgcataaagttcatcaagatgtattgctgggaagatgcc
tttgctcaaaacatcaacaaggtgaggtcagaagagagggggatactggagcaagccggg
gtcatccagagcttcacagtgggtgtggctcccatcgtcgtggtgatagcgagtgtatgc
acattcactctgcacatgaccataggctatgaccttactgcggctgaggctttcactgtg
gttgcagttttcaactccatgacctttgccttgaaagtcacaccattggctgtcaggtca
ctgtcggagggtgctgtggcaagcaaaaggtttcagaggctcttcatgatggatgacaga
gagtctgttttgatcaaattggaagatcctagcaatgcagtcgaatttcgggatgccaca
ctggcatgggaaaaggctcgaccgcccgctgcaaaacctaactcacctcccaagaaacag
ttcaacagaggagggatgaagcgagtgctacgcagggagaagcttagtctgtacatttca
acagaggacggcaaaggaatcaaggaaggtcccaacgcacaaagtctcctcacaaatatg
gagcaggaaagtccacaaagcaccatctcctccactcaaagcatacgacctccactgcac
aagaccctgcaccgcattgacctacgtattaaaaggggtgcactggtggggatctgtgga
ggtgttggtagtggaaagagctctcttctgtcggctctactgggacagatgacccggtta
gagggaagtgtagctgccagcggtggttttgcttttgtgtcccagcaagcctggatcctt
aatgaatcactgaaggagaacatcttgtttgggaaggagtatgacgaagacaaatataat
gctgttctggaagcttgctgtctgctcccagatcttccagagctgccatatggagacatg
acagagattggggagagaggtgccaacttgagtgggggacagcgtcaaagagtgagcatg
gctcgtgcactgtacagcgagcggcccatacttctcctggatgacccgctcagtgctgtt
gacgcttgtgtgggttcccatgtctttaacaaagctatacggggtgccgccaaaggcaag
acagtgctctttgtaacccatcagctgcagtatctgtcagagtgtgatgatatcattctg
atgaaggacgggcagattgcagagcacggcacccatgctcagctaatgggtaaagagcgt
gactatgccaccttattcaacagcatgcaacaggagaatctggtgaaagagaatttaaaa
aacaaacaacagaaggcaggtgcagaaaaggctgatagtgttgtcaaggttgccaaggtc
gcatccgaggtggagagcaaaaaaggaggacaactgatgaaagctgaagagaagggttct
ggtgcagtagcctggtcggtgtatagagcctacatcaaagcagcaggaggtccaatagtc
ttcatcatcaacaccttcttcttcctgtccaccacaggctgcatagccttctgtaactgg
tggctgagccattggatcaggcagggcagcgggaacacatcattaattttggtgaatgaa
acaatggaaagcaacagcatgaggctcaaccctcatattcggtactattcaactgtttac
gtcatctccatggcagctgctttattgctgaagacaatcagagggctggtgtttgtaaag
tgcacggtgaaggctgcctccgtgctccacgacaagctgttccgccggctcctcctcagc
cccatgcacttttttgatacaacacctctgggtcgtatcctgacccgcttctccagggac
atggatgaggtggatgtgcgtctcaccatgcaagctgaaatgctgctgcagaacctcacc
ctggtgctgttctgcctgggaatggtgggaatcatctttccttggttcctggtctccatc
ctgcccctcttagtcttccttttcattgtcaaccgtgtctccagggttttgatccgtgag
ctaaagcgcctggaaaacatcagccaatcacccttcacctctcacatcaccagcagtctt
cagggactctctaccatccatgcttatggaagggggcacgacttcctccaaagatatcag
gaattgctggacactaaccaggcctctaactacctcttcagctgcgctatgcgttggctg
gctgtccgcctggacctcatcagcatctctcttatcactggtgtagcacttctcattgtc
ttcatgcacaaacagatacctccagcctatgcgggcctggccatatcatacgcagtgcag
ctgactggattgtttcagtttacggtgaggctgctcacggaaaccgaggctcggtttaca
tcagtagagaggatcaatcattacataaagtttttagagagtgaagctccacgaaaaagt
cccgaggcagccactcctgccccctcttggcctcagcagggaaagattaccttccaggat
gttgagatgcgttatcgtgacaatctaccgctggtgcttaagaaattgtcctttaccatc
ctgcccgaagagacaatcggcattgtgggccgcacaggatcaggaaagtcctctctgggt
gtagctctgttccgacttgttgagctgacaggaggctctattatcatcgacggaatcaat
attgcccagattggtctggatgacctgcggagcaagctagccatcattcctcaagagcct
gtgctcttcatcggcaccgtcaggaccaatttagacccatgggaccaatacactgattca
cagatatgggacgctcttgagaaaacacatataaaagagatggtcagccaactgcctcac
tccctccactcagaggtaacagagaacggagagaacttctcagtgggagagcgacagcta
ctctgtgtggccagagctcttctgcgaaacagcaagattctcatattggatgaggcaaca
gcagccaccgacactgagacagatcgcctgatccaagagaccattcgctgtgaatttggc
agctgcaccaccctcatcatcgctcatcgtctcaacactgtgatgaactgcagcagggtc
atggtcctggacaacggccagattttggagtttgacagtccgactgctttgctggcagat
gaaaactcaagattcagagccatgatagaagcatcggaaaaccaaaggagatga

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