Scomber scombrus (Atlantic mackerel): 133986246
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Entry
133986246 CDS
T10651
Symbol
col23a1a
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133986246 (col23a1a)
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NCBI-GeneID:
133986246
NCBI-ProteinID:
XP_062282046
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Position
9:19106806..19220598
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AA seq
622 aa
AA seq
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MDTASDSVGESKPVCRCAPKSAVQRWLPGFPIALCLLMSLSSITVCLLMSLKTYQLESQM
EKASIFHPPHMAFLNEDGTLIPELSSSIGKLVEEKVVVLMPRLRTTRDVGQECSCPPGPP
GKRGRMGRRGDPGKXRPPPGKAGRDGYPGPLGLDGKPGLPGPKGSQGPAGPKGDKGDQGD
IGPRMVFPRYDHGFLSGDQSSSFQRRFLKGDQGQAGPAGPPGPPGPPGPRGPPGNTGKDG
PRGPAGEPGFPGRDGSDGQQGLPGKPGEDGHPGYQGLQGPPGSKGEPGFGEKGERGMDGL
PGLKGDKGEIGEQGPQGPMGYPGEKGAEGSSDIIDFNGKLLDAFQAIETISVSGPPGPPG
PPGPPGEKGELGLPGPAGVDGEKGPKGDMGETGPPGERGEKGEMGLSGPAGMDGHKGEKG
DCRLDDNLVQMISQPGPPGLPGPPGAPGTPGSMGLHGMPGPKGEPGFGMRGEKGDTGAPG
FKGLDGHPGPTGAPGLVGLPGAKGDKGRPGEPGLDGFPGQMGGKGDRGERGEKGDRGSVG
KRGLKGQKGEQGPPGLDQPCPVGCDKTKDLSVEAGLSSPTPLPPSGPEAPCPVGHDGLPI
PGCWHKEEMARQKLKRKRLSQP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacacagccagcgactctgtcggagaaagtaaacccgtgtgtcggtgtgcgcctaag
tccgcggtccagcggtggcttccaggctttcccatcgcactgtgtttactgatgtccctg
agctccatcactgtgtgtcttctgatgagcttgaagacttaccaactcgagagccaaatg
gagaaagcgtccatcttccacccaccacacatggcttttctaaacgaggatgggacccta
attcctgagctgagctcctcaatagggaagctcgtggaagagaaagtggtggtgctgatg
ccgagattgcgcacaactagggatgttggccaagagtgctcctgtcctccagggcctcca
ggaaagcgtggaaggatgggaagaagaggggaccctggtaagtgacgcccaccacctggc
aaggctggacgggatggatacccgggaccacttggcttggatggcaaaccaggtttacca
ggtcccaagggaagtcagggaccagccggacccaagggagataagggtgaccaaggagac
attgggccaaggatggtctttccccgatatgaccatggctttctctctggagaccagtcc
agcagctttcagagacgttttctgaagggtgaccaaggccaggccggacccgctggtcct
cccggtccccctggtccccctggccccagaggcccccctgggaacaccggcaaagatggg
ccccgtggtcctgctggagagccaggttttccaggccgtgatggctctgatggacagcaa
gggttgcctggaaagccgggagaagatggtcatccaggctatcaaggactacagggtcct
ccagggtcaaagggcgagccaggttttggagaaaaaggagagagaggcatggatggactc
ccaggacttaagggagacaaaggggaaattggagagcaaggaccacagggacccatgggt
tatcctggagaaaaaggtgccgaaggctcctcagacatcattgacttcaatgggaagctt
ctagatgctttccaggctatcgagaccatcagtgtttcgggcccacctggaccacctggg
cccccaggccctccaggggaaaagggtgagcttggtttaccggggccagcaggagttgat
ggggagaagggacctaaaggagacatgggtgagacaggacctcctggagagagaggagag
aagggggagatgggactgtctggacctgctggtatggacggacataagggggagaaaggc
gactgcagactggatgacaacctggttcagatgatttcccagccgggaccacctggccta
ccaggcccgcctggagctcctgggacccctggatccatggggctgcatggaatgcctggt
ccgaagggggaacctggatttgggatgaggggagagaagggggatactggtgctcccgga
ttcaaaggtctggacggccaccctggtccaactggtgctccagggttagtggggcttcca
ggtgcaaagggagataaaggcagaccaggcgagcctggattagatggtttccctggccaa
atgggagggaaaggtgaccgaggggaaagaggagaaaagggtgacaggggatcagtggga
aagagaggtctaaagggccagaagggagagcagggtcctccaggcctggaccagccctgt
cctgtgggttgcgataagactaaagatctctctgtggaagcagggctttcttctcctact
cctcttcctccttccggccccgaggccccctgccctgtgggacatgacgggctgcccata
ccaggttgctggcacaaggaggagatggcaaggcagaagctcaaacgcaagcgtctctct
cagccttga
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