Scomber scombrus (Atlantic mackerel): 133986293
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Entry
133986293 CDS
T10651
Name
(RefSeq) transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133986293
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
133986293
NCBI-ProteinID:
XP_062282104
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Position
9:complement(20300530..20303462)
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AA seq
657 aa
AA seq
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MLRHMFSNLLLLWSLSHEVYATGLTYGDPKEQSWNNHNLSSVPLDLDVRLRKLDLSNNFI
RQLHTLGLVYLEQLDLSCNQLGFISEGAFENLARLEELNLSRNALNNNLGSNSKALQSIS
ELKSLDISMNGLSDTAVELYLRNKLSLDQLKMTGNALTRLTHNLFKESKSLRAINIEDNL
ISVIDQGTFEPLTKLETLNLAQNNLAHICDFKLHQVKYLNLSRNSVEFFLTHEDHQLYRL
EILDLSYNKLLYFPIVPKINSLKYLHLQNNMVGALNSEATMVSEANYLYNEIVNHGDTRV
KKNDLHANWRLMPLVYIDLSYNHFRSFPLETLILLSSLETLNFSHNCVQNIIWNVRNDSE
SGHNRQLFFSSLKYLDLQSNGIVSISPRFLKTLTHLETLNLQDNSVLPCSPMDHLPSSQS
TAQINYNTSCVVFGQLRTLKHLNLKENNIKMLHANSFQKTSLISLNLARNVHMAMHVDAL
EDVQGSLQSLTLSELNMTSSDLSLPCMPALTQLNVSNNDLDIMPSSLSCSPLREIDIRNN
AFVSLNHSLILALSVHLNMMHISGNYFNCCDSEWLMLLNESNIKLPDVGQAECFISAGNI
LITEYLNSSEIHCLFHTKTQETHFGQMIIIILFIFAILIVFIIFTRRMCCNQRSLIV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgctcagacacatgttctctaatcttctactgctctggtcacttagccatgaggtttat
gcaactggactaacatatggtgacccaaaggagcagtcctggaacaaccacaacctctct
tctgtccctctggatttggatgtaaggcttagaaaactagacctgtccaataacttcatc
agacagttgcacacacttggtctggtatacttggagcagctggacctgagctgcaaccag
ctgggtttcatctccgaaggggcttttgaaaacctggctcgacttgaagagttgaatttg
tccagaaatgcgctgaacaacaaccttggcagtaacagcaaagccctccaatccatcagt
gaactgaagagtttggatatatcaatgaacggtctgagtgatactgcggtggagctatac
ctccgaaacaaattgtcccttgatcaactgaagatgactggtaatgctttaacaagactt
acacacaacttgttcaaagagagtaaaagtttgagggccattaatattgaagacaatctg
atatcagtgattgatcagggcacattcgaaccattgaccaaattagagacgctaaacttg
gcccaaaataatctggcccatatctgtgattttaaattacatcaagttaaatatctgaat
ctcagtagaaattcagtagagttctttcttacacatgaggatcaccaattgtacagactt
gaaattcttgatctaagttataacaaattactttatttcccaattgttccaaagattaac
agtttgaagtatcttcatttacaaaataacatggttggtgccctgaattcagaggcaaca
atggtgtcagaagccaattatctttataatgagattgtaaatcatggtgacactagagtt
aagaaaaatgaccttcacgcaaactggaggctgatgcctctggtttatattgacttgagc
tataaccacttcagatctttcccactggagacgttgatccttctctcgtctttggaaacg
ctgaatttcagccataactgtgttcaaaacatcatctggaatgttagaaatgatagtgaa
tcaggacacaatcgtcagcttttcttttcttctttaaagtaccttgacctgcaaagcaat
ggaattgtatctatttcccctcgcttcctcaagacactgacacatttagagacattaaat
cttcaagacaattccgtgctgccttgttctcccatggaccatttgccaagctctcagtca
acagcacaaataaattacaacacatcctgtgtcgtctttgggcaattaaggactcttaaa
cacctcaatcttaaagaaaacaacataaagatgcttcacgcaaactcatttcagaaaacc
tctttgatttccctcaatcttgcaagaaatgtacatatggcaatgcatgtggatgcactt
gaggatgtgcagggaagtcttcagtctttgactctcagtgaactcaacatgaccagctct
gatctgtctttaccttgtatgccagcgttaacccagctgaatgtatcaaacaatgatcta
gacatcatgcccagcagtttgagttgctctcccttgagagaaatcgacataagaaataat
gcctttgtgtctttaaaccactctttgattcttgctttatctgtacacctaaatatgatg
cacattagtgggaattattttaattgctgtgacagtgaatggctgatgctcctaaatgaa
tcgaatatcaaactgcctgatgtcggtcaagccgaatgcttcataagtgctggtaacatt
ttgataacagagtatttgaacagttctgaaatacattgcttgtttcatacaaaaacgcag
gaaactcactttggacaaatgattataattattttatttatatttgcaatattgatagtg
ttcatcatattcaccagaagaatgtgttgcaatcaaagatcattaatagtgtga
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