Scomber scombrus (Atlantic mackerel): 133986294
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Entry
133986294 CDS
T10651
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04060
Cytokine-cytokine receptor interaction
ssco04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
133986294
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
133986294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
133986294
04090 CD molecules [BR:
ssco04090
]
133986294
Cytokines and neuropeptides [BR:
ssco04052
]
Cytokines
Tumor necrosis fators
133986294
CD molecules [BR:
ssco04090
]
Proteins
133986294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
BclA_C
Motif
Other DBs
NCBI-GeneID:
133986294
NCBI-ProteinID:
XP_062282105
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All DBs
Position
9:complement(20303600..20306345)
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AA seq
234 aa
AA seq
DB search
MLYNALLSLTAFMFCLSLFLVHKASVLENDFRKVQGDIILKLNQPRSEGVNGKLAKMSKT
REDIKPSTIQISQSSLKISSRRVKRGQGSCRAPTSFLQLTANTNKQPSIRGNITEIPWTV
SAQQGNAISANENRIVVQEDGYYLVFGQVLFESPSTVMGHVIRSWGSTTSGTGSTELLCC
LQEISDAAAANTCYTSGIVQLRQNDELELVIPYRPQALISMDAESTFFGVIQLN
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaatgctttattatcactaacggcatttatgttttgtcttagtcttttcctg
gtgcacaaagccagtgttttagaaaatgattttcgcaaagtccaaggggatataattctg
aaattaaatcagccacgttctgagggagtcaatgggaaactggccaagatgtctaaaaca
agggaggacataaaaccaagtactatccaaatatctcagagttctctgaagatatcttct
aggagagtaaaacggggacagggcagctgcagagctccaacatcatttctgcagttaaca
gctaatactaacaaacagccaagcataagaggaaatataacagagatcccttggactgtt
tctgcgcagcaaggaaatgcaatttcagctaatgaaaacagaattgttgtccaagaagat
ggttattacttggtgtttggacaagttttgttcgagagcccaagcacagttatgggacat
gtaattcgaagttggggttccacgacatcagggacaggttcaacagagcttttgtgctgt
ctgcaagagatatccgatgcagctgctgccaatacatgctacacctcaggcatagtgcag
ctgcgtcagaatgatgagctagaactggtgataccataccggccccaagccctgatctcc
atggacgcagagtcaacattttttggtgtcatacagctgaactga
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