Scomber scombrus (Atlantic mackerel): 133986311
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Entry
133986311 CDS
T10651
Name
(RefSeq) aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like
KO
K15437
aminoacyl tRNA synthase complex-interacting multifunctional protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssco03016
]
133986311
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133986311
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Paralog
GFIT
Motif
Pfam:
tRNA_bind
HTH_SB
HTH_28
HTH_29
HTH_32
HTH_23
HTH_Tnp_Tc3_2
HTH_38
HTH_Crp_2
DUF742
HTH_Tnp_Tc3_1
COMM_HN
HTH_33
HTH_5
Sigma70_r4
HTH_21
tRNA_bind_2
Sigma70_r4_2
HTH_IclR
DDE_Tnp_ISAZ013
Motif
Other DBs
NCBI-GeneID:
133986311
NCBI-ProteinID:
XP_062282126
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All DBs
Position
2:complement(23332215..23340773)
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AA seq
316 aa
AA seq
DB search
MEDICSNTGERMGRSEELSDFQRGTVVGCHLSKKSVREISALLNLPRSTVSAVILRWKRG
GITTALPRSGRPHKLKEEDRQMLEQIAVEKCLPSVNALTTEFQSASGVDVSPKTIRRELR
EMGFRGRVSTYNKPAGRKKAKTKQAAACQDEAQMDVSHLDLRVGRIISALQLPETDSLYR
EEVDVGEASPRTVVSELGKHIPVDQMQDRMAVLLCNLKPVKMSGVVSQAMVMCAISPDKV
EILDPPSGAAPGDRVTFQGFPGEPDKELNPRKKVWEQVQPDLRTDGQCVATYRGAAFQID
GKGVCRAQTMSNSEIK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatctgctcaaacactggcgagaggatgggtcgcagtgaggagctcagtgac
tttcagcgtggcaccgtcgtaggatgccacctgtctaaaaagtcagtgcgtgagatttca
gccctgttaaacctgccacggtccacagtgagcgccgttattttgaggtggaaacgcgga
ggaataaccacggctctgcctcggagcggccgaccgcacaagctgaaggaggaagaccgt
caaatgctggagcagatcgcggtggaaaagtgtttgccctcagtaaatgctctcaccacc
gagtttcagagcgcgtccggagtcgacgtgagccccaagactatccgccgggagctgcgg
gagatgggcttccgcggcagagtatctacgtataacaagcctgcaggaaggaagaaagca
aagacgaagcaggcagccgcctgccaagatgaggcccagatggatgtgtctcatctggac
ctgcgtgttggacgtataatctcagccttgcagcttccagaaactgacagtctgtacagg
gaggaggtcgatgttggagaggcttctccgcggacggtggtcagcgaactgggcaagcat
atacctgtagaccagatgcaggaccgcatggcagttctgctgtgcaacctgaaaccagtc
aagatgagtggagttgtgtcccaggcgatggtcatgtgtgccatctctccagacaaagtc
gaaatccttgatcctccgagtggagcagcaccaggggacagagttaccttccagggtttt
ccaggtgaacccgacaaagagctgaaccccagaaagaaggtgtgggagcaggttcagcct
gatttacgcacagatggccaatgtgtcgcaacctacaggggagctgcctttcaaatcgat
ggcaagggagtgtgcagagcccaaaccatgagcaacagtgaaatcaaataa
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