Scomber scombrus (Atlantic mackerel): 133986329
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Entry
133986329 CDS
T10651
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Protocadherins
133986329
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133986329
NCBI-ProteinID:
XP_062282141
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Position
9:complement(17344602..17347064)
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AA seq
820 aa
AA seq
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MGWMWITVCRGRWQAVFVILCLFKLSSVSGQARYTIQEEQAEGSFVGNIARDLGLDVARL
ISGKARIITKGSRQYVDLNRDKGNLVIKERIDREELCGQTTPCSFSFEVILENPIQLYRV
TVEVIDINDNSPSFQKDEINLKIAENAALGTRFSLVSADDPDVGINDIQKYTLKPSDNFK
LEVQSQPDGGEFIEMVLQTPLDREKEDTHSLVLIASDGGEPHRSGTVRIQIYVLDANDNA
PVCSQPVYKADIRENSPEGSVVTTVSANDADKGVNGIVTYSFPHVAKEAKQLFEVNSKTG
EITVTGKLDFEKSKTYQLNVQASDHGGFTDTCKVFVQILDENDNVPTIQLMSFSNSISED
SSPGSTIAVVNVDDEDSDGNGVVKCSINSDIPFKIESSLTGYYTIVTEDFLDRESIPEYN
ITITVSDQGSPPLSNSKNINVKVSDVNDSPPKFKQSEYSKTVPENNSPGLSMFTISASDA
DWGQNARVSYFLEEKEINGVSVSSLVSINSENGVVHAVRSFDYEQIKWFEFNVTARDAGS
PPLSSVATVKIMIQDQNDNPPQVLYPVQTGGSVVAEMVPRSADVGYLVTKVVAVDVDSGQ
NAWLSYKLQKATDRALFDVGLQNGEIRTIRQVTDKDPVKQRLTVIVEDNGQPSRSATVIV
NVVVADSFPEVLSEFTDFTHDKEYNDNLTFYLVLALAVVSFLFITCVVVIISVKIYRWRQ
SRILYHSNLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRKSDCKFGRAGSQNVLIM
DPSSTGTMQRIQSEKSILDELDSPLEVRVFIRDSPQTSYE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggggtggatgtggataaccgtctgcagaggccgatggcaagctgtgtttgtcattctt
tgtcttttcaagctgagctcagtgtccggacaggctcggtataccatacaggaggagcag
gcagaagggtctttcgttggaaatattgctagagatttaggcttggatgtggcgagactc
atatcaggtaaagctcgtattattacaaaaggaagtcgacagtatgtggatttaaacaga
gacaaaggaaatcttgttattaaagagcgaatcgaccgagaagagctttgtggacagacg
acgccctgtagcttcagtttcgaggtcattttagaaaatccgatccagctttatcgggta
actgtggaggtaatagacattaatgataacagtccgtcgttccaaaaggatgaaatcaat
ttgaaaattgctgaaaatgctgcactagggactcgtttctctttggtgagtgcagacgat
cctgatgttggcattaacgatattcagaaatacacacttaaaccctcagataattttaaa
ttggaagtccagagccaaccggatggaggcgaattcatcgaaatggttttacagaccccg
ttagatcgagagaaagaggatactcactcactcgtgttgattgcttcggatggcggtgag
ccacacagatcagggacggtgcgtattcagatatatgttctagatgcaaacgataatgcg
ccagtgtgtagccagcctgtttataaagcagatatcagggaaaattctcctgaaggatcg
gtggtaaccactgttagtgcaaatgacgcagataaaggagtcaatggtatagtcacttat
tctttcccccatgtcgctaaagaggcgaagcagctgtttgaagtaaattctaaaacagga
gagattacagttacaggtaaactagattttgaaaaatctaagacctatcaattaaatgtt
caggctagtgaccacgggggatttacagatacgtgcaaagtttttgttcaaatacttgat
gaaaatgacaatgtccctacaatacagcttatgtcattttctaactctatatcggaggat
tcttcccctggttcaactatagctgttgttaacgtagatgatgaagactctgatggtaac
ggtgttgtcaagtgctccattaactctgacataccctttaaaattgaatcttcattaaca
ggatattatacaatagtaacagaagacttcttagacagagaaagtattcctgagtataat
atcaccataaccgtctctgaccaaggctctccgcctctgtctaacagtaaaaacattaat
gttaaagtgtctgacgtgaatgacagcccacccaaattcaagcagtcagaatatagtaag
actgtaccagagaacaactctcccggattatctatgtttactatcagtgctagtgatgca
gactggggccaaaacgctcgagtgtcttacttcctggaggagaaagagattaatggagta
tctgtgtcgtcattagtgtccataaactcagaaaacggtgtcgttcatgcagtgaggtcg
tttgattatgaacaaatcaaatggtttgaattcaatgtgactgcacgtgatgccggatct
cctcctctgagttcggttgctacagtaaaaataatgatccaggaccagaacgacaacccc
cctcaagttctgtacccagtccaaactggtggctctgtggtggctgaaatggtccctcgt
tcagcagatgtgggctatctggtgactaaagtggtggctgtggatgtggactctggacag
aatgcctggctctcctataaactgcagaaagccacagacagggcgctttttgacgtgggc
ttacagaatggagaaataagaacaatccgccaggtgactgataaagatcctgtgaaacaa
agactgactgttatagtggaggacaacgggcagccctctcgttcagctacagtcattgtt
aacgtggtggtggcggacagcttccctgaagtgctgtcagagttcacagactttactcac
gacaaggagtacaatgacaacctgactttttacttagtgttggctctggctgtagtttcc
ttcctcttcatcacgtgtgtagtggttattatatcagtgaaaatctacagatggagacag
tctcgcatcctgtatcactccaatctccctgtgattccatattatccaccacgttactca
gacactttggggacagggactctccaacacgtgtacaattacgaggtgtgcaggacgact
gactccagaaagagtgactgtaagttcggcagagctggtagtcagaatgtgctgataatg
gaccccagttctacagggacgatgcagcggatacagagtgaaaagagcatcctggatgaa
cttgactctcctttagaggtgcgtgtctttattcgtgattctccacaaacttcctatgaa
taa
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