Scomber scombrus (Atlantic mackerel): 133986359
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Entry
133986359 CDS
T10651
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A
KO
K20165
TBC1 domain family member 2A
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133986359 (tbc1d2)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133986359 (tbc1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_alsin
PH_3
DivIC
HH_AprE
PH_8
Neisseria_TspB
Motif
Other DBs
NCBI-GeneID:
133986359
NCBI-ProteinID:
XP_062282166
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All DBs
Position
9:complement(187330..217519)
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AA seq
973 aa
AA seq
DB search
MAMEGSGSAGNPSAASSRSLPVCSGEETLQRADWILTSEEEQQSSRAVLPSSGPKPDPDP
DPDPDPDPNPDPNPDPNPTENQNPQSPLCLPVSPAVTMETCPQVRLCGFLQKQGGPLRVW
KQRWFTYEEKKNQLFYYRTPQDVMPLGRVELSGATYTYPLKAERGTFHIQTPERTFILKA
VTQELMMYWLQQLQLKRWQHRLMSSCPDPTNNNTTDDFLPLLQSPLGLVGEEAANTPLPW
KPLSNMSIKHPLIEIQNSVHSLRKRSSQEWSQSVFHVEAPLWLPPSTPTASLPPSTPTAP
LPPSTPTAPLPPPLPSAGPAGCPPPTGPRSRKMKSRSSSTLPVLRRDAVSSSRLQQEKHM
LMEEVKSQKELVWLLHKALEAAQLEKRTCAEFLAVEGEQERLELLRHRERQAADLRGRLE
EAKEEAERTSRSLTQRDSQLAELQHDIRTLMEKNNAKQEVIIKLSDQVTACMSDPRLSTW
TGGGGLDSQTFKQLQQQIENLKDDIEAYKTQNKFLNSEIYQLTKLWRNSSEQEKSLMVKC
AYLEAGNCRVESRYLGVLRKLQENKSLDPVQQGAVQKMIEDALKGELKSVIKLNTNRDHD
EYGFKIIPDYEVEDMKLLAKIQALEIRSHNLLHQEGVERPLLSRWAQYLAGRSDDDLCPS
PELKGLLRGGVPREYRQQVWRWVVRARTRTMRERHPQRYQQLCEKSRTSPHPASRQIQLD
LHRTLTTNQHFSSPSSPALQQLQRILLAFSWQSPAIGYCQGLNRLAAIALLVLQSEEDAF
WCLVCVVETIMPQDYYTKDLVASQADQRVLKDFLSEKLPRLASHFDDHNIDVSLITFNWF
LVVYVESLPSDILLPLWDAFLYEGTKVMFRYALALLKYKEDDILKIQDSVEIYQYLRFFT
KTISDGRKLSSIAFTVMNPFPGRLLRNRRALHLERLQGELQELEEQQRAFVTESSERKDK
DLDAGVSEDDDEL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggctatggagggaagcggctcggcaggaaatcccagcgctgcctcgtctcgctcactt
cctgtctgctctggggaggagacgcttcagagagctgattggatcttaacttcagaggaa
gaacagcagagcagcagagcagtcctcccgtcctccggtcctaaaccagacccagaccca
gacccagacccagacccagacccgaacccagacccgaaccctgacccgaacccaacagag
aatcagaacccacagagccccctgtgtctccccgtgtccccggccgtcaccatggagacg
tgtcctcaggtgaggctgtgtggtttcctgcagaagcagggcggacctctgcgtgtctgg
aagcagcgctggttcacctacgaggagaagaagaatcagctgttctactaccgcacgccg
caggacgtgatgccgctcggccgggtcgagctcagcggcgccacctacacctacccgctg
aaagctgagaggggcaccttccacatccagacgcctgaacgcaccttcatactaaaggct
gtgactcaggagctgatgatgtattggctgcaacagctgcagctcaaacgctggcagcac
agactgatgagtagctgtcctgacccaacaaacaacaacactacagatgacttcctgccg
ctgttgcagagtccgctgggtctggtgggggaggaggcggcgaacacaccgttaccatgg
aaaccgctcagcaacatgtcaatcaaacacccgctcatcgagatccaaaactccgtccac
agtcttcgtaagcgatcgtctcaggaatggagtcagagtgtgtttcatgtggaggctcca
ctgtggctgccccccagcactcctactgcctctctgccccccagcactcccactgctcct
ctgccccccagcactcctactgcccctctgccccctcccctcccatcagctggtccggcc
ggttgcccccccccgaccggcccgcggagcaggaagatgaagagtcgcagctcgtccacc
ttgccggtcctccgcagagacgctgtgtcatcgtcccgcctccagcaggagaaacacatg
ctgatggaggaagtcaagtcccagaaggagctggtgtggctcctgcataaagccttggag
gcggctcagctggagaagagaacctgcgctgagtttttggcggtggaaggcgagcaggag
cgtctggagctgctgcggcaccgagagcggcaggcggccgacctgcgaggccgactggag
gaggccaaggaagaggcggagaggacgagcaggagtctgactcagagagactcacagctg
gccgagctgcagcacgacatcaggacgctgatggagaagaacaacgccaagcaggaggtg
atcatcaagctgtctgatcaggtgaccgcctgcatgtctgacccgcgcctctccacctgg
accggcggcggcggtctggactctcagaccttcaaacagcttcagcagcagatcgagaac
ctcaaggacgacatcgaggcgtataagactcagaacaagtttctgaactctgagatttac
cagctgaccaaactgtggaggaacagctccgagcaggagaagagtctgatggtgaagtgt
gcctacctggaggccggtaactgtcgggtggagagccgctacctcggcgttctgaggaag
ctgcaggagaacaaatctctggatccggtccagcagggggccgtgcagaagatgatcgag
gacgctctgaaaggagagctgaagagcgtcatcaagctcaacacaaacagggaccacgat
gagtacggattcaaaatcatcccggactacgaggtggaggacatgaagctgctcgctaag
atccaggctctggagatccgctcacacaacctgctgcaccaggagggagtagagcggccc
ctgctgagtcgctgggctcagtacctcgctggcaggtctgatgatgacctttgcccttcc
ccggagctcaaaggtctgctgcgtggcggagtccctcgggagtaccggcagcaggtgtgg
cgctgggtggtccgagccaggaccaggacgatgagagaacgccacccacagcgataccaa
cagctgtgtgagaagagtcggacgtctcctcatccggcctccaggcagatccaactggac
ctccaccgcaccctgacgaccaatcagcacttctcctcaccatccagccccgccctccag
cagcttcaacgcatcctattggccttctcctggcagagccctgccattggctactgccag
ggactcaacaggctggcggccatcgctctgctggtcctccagagtgaagaagatgcgttc
tggtgtctggtgtgtgtggtggagaccatcatgcctcaggattactacaccaaggacctg
gtggcttctcaggcggatcaacgggtgctgaaggacttcctttcagagaagcttcctcgg
cttgcgtctcactttgatgatcacaacatcgacgtctctctgatcaccttcaactggttc
ctggtggtttatgtagagagtctgcccagtgacatcctgctgcctctgtgggacgccttc
ctgtacgaaggcaccaaggtgatgttcaggtacgctctggctctgcttaaatacaaagag
gacgacatcctgaagatccaggacagcgtagagatctatcagtaccttcgtttcttcact
aagaccatctctgacggcaggaagttgagcagcatcgccttcaccgtcatgaacccgttc
cccggccgcctgctgaggaaccggcgcgcgctgcacctggagcgcctgcagggggagctg
caggagctggaggagcagcagagggccttcgtcactgagagctccgagcggaaagacaaa
gacctggacgcgggcgtcagcgaggacgacgacgagctgtga
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