Entry |
|
Name |
(RefSeq) NLR family CARD domain-containing protein 3-like
|
KO |
K22614 | NLR family CARD domain-containing protein 3 |
|
Organism |
ssco Scomber scombrus (Atlantic mackerel)
|
Brite |
Pattern recognition receptors [BR:ssco04054]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133986371
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SSDB |
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Other DBs |
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LinkDB |
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Position |
9:1443666..1449607
|
AA seq |
1072 aa
DQESSEVPSGQSAQQHQTRLDSIFMLLEENIVTFVKNELKKMQKVLSSDDPEYLKSQSED
EEVFDGEEEEQRRSSTEAFLKITLHFLRRMKQEELADRLRSRTPVGSQHKLKSNLQKKFQ
CLFEGIIKAGNPTLLNQIYTELFITEGGTAEVNDEHEIRQIETATWKPDKPERTIRQEDI
FKTSPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKG
KKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNNDILTDVTESTSV
EVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVSMVTEVRGFTDPQKEEYFRKRFREK
KKAREIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSREGGELPKTLTEMYIHFLVVQ
TKLKNVKYHGGAETDPHWSPESSKMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAAS
VYSGVFTQVFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLLAEEQTTSQKS
ETIKDISAETDLYQSAVDKALQSPNGHLDLFLRFLLGLSLQNNQILLRGLLTKTGSSSKT
NEDTVEYIKKKINENLSAERSINLFHCLNELNDRSLVEEIQRYVNTGDLSADELSPAQWS
ALVFILLSSEKDMDVFHLNEYAASEEALLRLLPVVKASNKALLNGCNLSERSCAALSSVL
SSQSSRLTELDLSNNNLQDSGVKQLSDGLESPNCTLETLRLNDCNLSGGSHEALSSVLSS
QSSSLKVLDLSNNNLQDSVVKQLSAGLESPHCTLETLRLSGCLITEEGCGSLASALSSNP
SHLKELDLSYNHPGDSGEKLLSAGLEDPHWRLDTLSLQPAGVRWLTPGLRKYFCEVTLDP
NTANKKLKLSDNNRKVTYVTKKEEEQSYPDHPDRFALCPQLLCKDDLSGCCYWEVEWKGN
VYVSVTYRGIRRKGVGDDSEFGANNQSWCLNCSDGGYSVMHNNKQTSISSSSSSVSNRVA
VYVDCPVGTLSFYRVSSDTLIHLHTFNTTFTQPLYAGFGFWRTGSSVSLSPL |
NT seq |
3219 nt +upstreamnt +downstreamnt
gaccaggagagctcagaggttcccagtggtcagtctgcccagcagcatcaaacacggctg
gactccatatttatgctgctggaggagaacatcgtcacttttgtgaagaacgaactgaag
aagatgcagaaggttctgagttcagatgacccagaatacctaaaaagtcagagtgaggat
gaggaggtgttcgatggtgaggaggaagagcagaggaggagcagcacagaagcatttctg
aagatcacactgcacttcctgaggagaatgaagcaggaggagctggctgaccgtctgcgg
agcagaactcctgttggcagtcaacataaactcaagtctaacctccagaagaagtttcag
tgtctgtttgaggggattattaaagcaggaaacccaacccttctgaatcagatctacaca
gagctcttcatcacagagggagggactgcagaggtcaacgatgaacatgagatcagacag
attgaaacagcaacctggaaaccagacaaaccagaaagaacaatcagacaagaagacatc
tttaaaacctcacctggaagagatgaaccaatcagaacagtgatgacaaagggagtggct
ggcattgggaaaacagtgttaacacagaaattcactctggactgggctgaagacaaagcc
aaccaggacatacatttcacatttccattcactttcagagagctgaatgtgctgaaaggg
aaaaagtacagcttggtggaacttgttcatcacttctttactgaaaccaaagaagcagga
atctgcaggtttgaagagttccaggttgtgttcatctttgatggtctggatgagtgtcga
cttcctctagacttccacaacaatgacatcctgactgatgttacagagtccacctcagtg
gaagtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggata
accacaagacctgcagcagccaatcagatccctcctgagtgtgtcagcatggtgacagag
gtcagagggttcactgacccacagaaggaggaatacttcaggaagagattcagagaaaag
aagaaagccagagaaatcatctcccacatcaagacatcgcgaagcctccacatcatgtgc
cacatcccagtcttctgttggatcactgctacagttctggaggatgtgttgaaaagcaga
gagggaggagagctgcccaagaccctgactgagatgtacatccactttctggtggttcag
accaaactgaagaatgtcaagtatcatggaggagctgagacagatccacactggagtcca
gagagcagcaagatgattgagtctctgggaaaactggcttttgagcagctgcagaaaggc
aacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctca
gtgtactcaggagtgttcacacaggtctttaaagaggagagagggctgtaccaggacaaa
gtattctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgtccatctg
acattcatcaactctggagtcaatctgctggcagaagaacaaacaacatcccagaagtct
gaaacaataaaagacatatctgcagagacagatctctaccagagtgctgtggacaaggcc
ttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctgtcactg
cagaacaatcagattctcctacgaggtctgctgacaaagacaggaagtagctcaaagacc
aatgaggacacagttgagtacatcaagaagaagatcaatgagaatctgtctgcagagaga
agcatcaatctgtttcactgtctgaatgaactgaatgatcgttctctagtggaggagatc
caacgttacgtgaacacaggagatctctccgctgatgaactgtctcctgcacagtggtca
gctctggtcttcatcttactgtcatcagaaaaagatatggatgtgtttcacctaaatgaa
tatgctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaa
gctctactgaatggctgtaacctctcagagagaagctgtgcagctctgtcctcagttctc
agctcccagtcctctcgtctcacagagctggacctgagtaacaacaacctgcaggattca
ggagtgaagcagctttctgatggactggagagtccaaactgtacactggaaactctcaga
ctgaatgactgtaacctctcaggaggaagtcatgaagctctgtcctcagttctcagctcc
cagtcctctagtctgaaagtgctggacctgagtaacaacaacctgcaggattcagtagtg
aagcagctttctgctggtctggagagtccacactgtacactggaaactctcaggctgtca
ggatgtctgatcacagaggaaggctgtggttctctggcctcagctctgagctccaacccc
tcccatctgaaagagctggacctgagctacaatcatccaggagactcaggagagaagctt
ctgtctgctggactggaggatccacactggagactggacactctcagtctgcagcctgct
ggagtacgatggttgacaccaggtctgaggaagtatttctgtgaagtcacactggatcca
aacacagcaaacaaaaaactcaaactgtctgacaacaacaggaaggtgacatatgtgaca
aagaaggaggaggagcagtcatatccggatcatccagacagatttgctttgtgtcctcag
ctgctgtgtaaagatgatctgtctggttgctgttactgggaggttgagtggaaaggaaac
gtttatgtatcagtgacttacagaggaatcagaaggaaaggagtcggtgatgactctgag
tttggagcgaataatcagtcctggtgtctgaactgctctgatggtggttactctgtcatg
cacaataacaaacaaacatctatctcctcctcctcctcctctgtctctaacagagtagca
gtgtatgtggactgtcctgttggcactctgtccttctacagagtctcctctgacacactg
atccacctccacaccttcaacaccacattcactcagcctctgtatgctgggtttgggttc
tggcggactggttcttcagtgtctctgagtcctctgtag |