Scomber scombrus (Atlantic mackerel): 133986401
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Entry
133986401 CDS
T10651
Name
(RefSeq) cohesin subunit SA-3
KO
K06671
cohesin complex subunit SA-1/2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133986401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133986401
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
133986401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
DHR-2_Lobe_C
DUF4140
Motif
Other DBs
NCBI-GeneID:
133986401
NCBI-ProteinID:
XP_062282203
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All DBs
Position
9:complement(12453513..12477490)
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AA seq
1219 aa
AA seq
DB search
MDRAEAKKGGEGLESLDDCSDSGSDFEVTMNATKRKKQALPKPRPPKRPRRKTALRTTSS
PSSSPIPTPPDPSLQRQQNPRGTSRRASPRPVTRVNEGNQGISAEDIYDAVRSGKSAMVT
VVDEWLDTYKRSREAGLLVLINFIVRSCGCKGVVSREMLDSMDNAEIISTLTKEFNEDSG
NYPLCTPGPQLKRFKAGLCEFARVLVRSCRNSLIYDEYLFPSLLAMLTGLSDSQVRAFRH
TSTLLAMRLMTGLVEVAVIVSVQLQTTQRRHNMENSKGEHDRASDRLEELQATINELQEN
REELSSMMNATFRGVFVHRYRDRLPEIRAACIEEMGMWLKMDPEDFLNDGCLKYLGWTLH
DKQSPVRLQCVRALQGLFQEKEFIGRLELFTSRFKERMLSMVLDKDPDVAVEVVNLLLLI
QQGTEEALREEECSHIYPLVYASHRGLASAASVFLYNKLKTVIAGDHQENDKCDNAAFFQ
ILISFYIQSEFHEHGVYLVDSLWRVAGAELRDWETMTSFLLQESGLMYEEEGALIELMMC
AIRQAAQATPPVGRTQGKKVILSMKDKKIQEQDRRRITTHFIPLLPQLLAKYSADAKMVT
LLVKAPLYFDLEMYNSAQWLEKHLDLLLSQICGIVEKHTEATVLEACAQLANTLSSDRYT
FSSRAHLAFSQLLDGLTECFSTYLSDLLQGTADDDDTYSAAIALKRIAALSSAKDPTGWK
LFDSCLELLKSRVESRDLEKELMVSALRCAAFHLMWAKVNVVNSTPTEAELKRLKKEVQS
FCRVCQRCLSLNQTEIRDKAFELLCDLMVLYNENSVRSEPALKTLIHLPSDSLRAELATF
LLDYVFTDPEDVELDGEDEELKITVLQKKRNQLAGYCKLVIYGVLDLAAATDILKHYNKF
FKDFGDIIKETLSKSKLINPVHSAKTVCLTLKQLFSEMLTEDLSMQDLGEIRDLAKKLAM
SFGIDLHRVRKPLVALHTDGIRFAFLDPYEGEEQHPNLAFLEILSEFSFKLLQQDRTQLA
AFLKSVCPSTALSWTAVRHYQRSLEGRSASKAKDHEVGGDATSSLDTPVAKRKRTTTPGS
VSRGSWLDSSSVHSSLPTPALTSTMLKQTAEQKTSRKPRAKESDVGSGLTEPESEEEFSS
GFQMRKVKPTRHRHSSSSQHFPTSDLNSHLTLLSLIEDEIEEREEAEIENYESGSDNESA
YTLPSTRHTSASVLDELFD
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtgcagaggcgaaaaaagggggagagggcctcgagtcattggatgactgctca
gactctggcagtgactttgaggtcacgatgaatgccacaaagcggaaaaaacaggcattg
cccaaacctcggccacccaagagacccaggcgtaaaactgcattgaggacgacgtccagc
cccagtagcagtcccatccccactcctccagacccctccctgcagaggcagcagaatccc
cgagggacttccaggcgggcctctcctaggcctgtgacgagagtgaatgaggggaaccag
ggtatcagtgcagaggatatctatgatgctgtccgttctggaaagagtgctatggtgacg
gtggttgacgagtggctggacacctacaaacgaagccgagaggcggggctgctggtgctc
atcaacttcattgttcggtcctgcggatgcaaaggagtggttagcagagagatgcttgac
agcatggacaatgccgaaatcatcagcacattaaccaaagagttcaatgaggattcaggg
aactaccctctgtgcactccaggccctcagctgaagcgtttcaaagccggcctgtgtgag
tttgctcgggttctggtgcgctcctgtcggaatagtctcatttatgacgagtacctcttc
ccctccctgctggccatgctcaccgggctgtctgactcccaagtcagagccttcagacac
accagcaccctgcttgccatgaggctgatgactgggctggtggaagtagctgtgatagtg
tctgtacagctgcagaccacccagcggcgacacaacatggagaatagcaagggggagcat
gacagagcctctgacaggctggaagagctgcaggccaccatcaatgagctgcaggaaaac
agagaagagctgtcctccatgatgaacgccaccttccgtggtgtgtttgtacaccgttac
cgtgaccggctgcctgagatccgggcagcatgtattgaggaaatgggcatgtggttgaaa
atggatcctgaagacttcctcaatgacggatgtcttaaatacctcggatggacccttcat
gataagcaaagtccagtgcgtctgcagtgtgtgcgcgccctgcagggtctgttccaagag
aaggaattcattggccgcctggagcttttcactagcagatttaaagagaggatgctcagc
atggtgctggacaaggacccagacgtggcagtggaagtggtcaatctgttgctgctgatc
caacaggggacagaggaagccctgagagaggaagaatgctctcacatctaccctctggtt
tacgcttcacaccggggcctggcgtctgcagccagtgttttcctctacaacaagctgaaa
actgtgatcgccggtgaccaccaggagaacgataaatgtgacaatgccgccttttttcaa
atcctcatctccttctacatccagagtgagtttcatgagcatggggtgtacctggtggac
agtctgtggcgtgtggcaggcgcggagctgagagactgggagactatgacgtcattcttg
cttcaggaatctggtttgatgtatgaggaggagggggctctcatagagctgatgatgtgt
gccatcagacaggcagcacaggcaaccccacctgttgggagaactcagggaaagaaggtg
atcctgagtatgaaggataaaaagatccaggagcaagaccggagacgcatcactacccat
ttcatccccttactgccacaactactggccaagtattcagcagatgcaaagatggtgacc
ctccttgtcaaagctccgctttacttcgacctggagatgtacaacagcgctcagtggctg
gagaagcatctggacctgctgctgtctcagatatgtgggattgtggagaagcacacagag
gccactgtcttggaggcttgtgcccaactggccaacactcttagctctgaccgctacacc
ttctcctcccgcgcacacctggcattcagccagctgttggacggcctgactgagtgcttc
agcacctacctaagtgacctgctgcagggtactgcagatgacgatgacacatacagtgca
gccattgccttgaaaaggattgcagcattgagcagtgccaaagacccaacaggctggaag
ctgtttgactcctgtctcgagcttctaaagagcagggtggagtccagagacctcgagaag
gagctcatggtgtcggctctgaggtgtgcagccttccacctgatgtgggccaaagtgaac
gtggtcaactccacaccaaccgaggcggagctgaagcgtctgaagaaggaggtccagtcg
ttctgcagagtctgtcaaagatgtttgtctctgaaccagactgagatcagagataaggca
tttgagcttttgtgcgatttgatggtgttgtacaatgagaattcggtccgctctgagccc
gctctcaaaactctcatccacctgccctctgactccctgcgtgctgagctggctactttc
ctcctggactacgtcttcactgatcccgaggatgtcgagctcgatggtgaagatgaggag
ttgaagataactgttctccagaagaagcgcaaccagctggctggctactgtaagttggtc
atctacggagtgctggacctcgctgccgccacggacatcctcaaacactacaacaagttc
tttaaagactttggtgacatcattaaagagaccttaagcaagagcaagctcatcaatccc
gtacacagcgccaagactgtttgtctgactctgaagcagctgttctcagagatgcttaca
gaggacctcagcatgcaggatctcggtgagattagagatctggccaagaagcttgccatg
agctttggcatcgatcttcatcgagttcgcaaaccactggtggccctgcacacagacggg
atacgctttgctttcctggacccttatgagggagaagagcagcacccaaacttggccttc
ttggagatcctcagcgagttcagtttcaagctgctgcagcaggaccgcacccaacttgca
gcgttccttaaatcagtgtgtcccagcactgccctctcctggacggctgtgagacattat
cagcgttctttggagggacgctctgcttccaaagccaaagaccatgaggtgggaggagac
gccacctcctcactcgatactcctgtagctaaacgcaagaggaccaccactccgggttcg
gtgtccagaggatcctggttggacagcagtagtgtccatagcagcctgccaaccccagcc
ctcacctccaccatgctgaaacagacggcagagcagaagacctccaggaaaccaagagcc
aaagagtctgatgtgggcagtggcttaactgagccggagtctgaggaggagttttcctca
gggtttcagatgcgaaaggtgaaacccaccagacatcgccactcctcctccagccagcat
ttccccacctcggacctgaactcccacctcaccctactttctctgattgaggacgagatc
gaagagagagaggaagctgagattgagaattatgaaagtggttctgacaacgaatctgcg
tacacactgccgtccacacgtcacacctcagcgagtgtccttgatgagctctttgactga
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integrated database retrieval system
