Scomber scombrus (Atlantic mackerel): 133986460
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Entry
133986460 CDS
T10651
Symbol
gpc4
Name
(RefSeq) glypican-4
KO
K08110
glypican 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133986460 (gpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssco00535
]
133986460 (gpc4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
133986460 (gpc4)
Proteoglycans [BR:
ssco00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
133986460 (gpc4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
Others
133986460 (gpc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
BLH_phosphatase
Motif
Other DBs
NCBI-GeneID:
133986460
NCBI-ProteinID:
XP_062282270
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Position
9:24585124..24618531
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AA seq
559 aa
AA seq
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MKTLLVLCVVCTLAVLSVSGTEEQKLNNCNDVRAAYSSKGFNVNDVPNKGINGAPLKVCP
QGFSCCTVEMEEKLSQQSHTEIKAPVSRLSTNLQSTFKQRHDHFDKFFRELLKNAEASLH
NMFVRTYGMMYVQNAELFRNFFESLTRYYVSGSAAVNLDSMLSDFWAELLERMFRLVNVQ
YEFSDAYMECVSRHTDQLQPFGDVPRKLRIQLTRAFVAARTFVRGLALMPEVVNKVSTVN
ASPSCVRAAMKMLYCPYCSGQVELKPCQNYCLNVMRGCFANQADLDTEWNNFLDAMLSLA
ERLEGPFNFESVTDPIDVKISEAIMNMQENSMQVSQKVFQGCGQPKLSMAFRSKRAVKET
GFTGRFRPYSPDARPTTAAGTSLDRLTSDVKKKLKNAKKFWSTLPETVCTGERIAPGDDC
WNGTAKSRYESVVISSGLANQVSNPDVDVDITKPDIMIRSQIAVLKEMTSRLKAAHNGHD
ISIENVGDDEESSGGEESGSGCDSPSCDTDRDMYFSTPPNPGKPRVDPVQASSAVVASQG
SMALALCGLALTLLAAHLR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctgctggtgctgtgtgtggtttgcacgctggccgtgttgtctgtttcgggc
actgaggagcaaaagttgaataactgcaacgacgtccgcgctgcttatagctccaaaggc
ttcaacgtcaacgatgtacccaacaaaggaataaacggagcccccctcaaagtgtgtccg
cagggcttttcctgctgcaccgtggagatggaggagaagctgagccagcagagccacacg
gagatcaaagcgcccgtctccaggcttagcaccaacctacaatccaccttcaaacagagg
cacgaccactttgacaagtttttccgtgagctcttgaagaacgcagaggcctcgctgcac
aacatgttcgtgcggacctatgggatgatgtacgtgcagaacgctgagctcttcaggaac
ttcttcgagtccctgacgcgatactacgtgtcgggcagcgccgccgtcaacctggactcc
atgctgtcggacttctgggccgaactcctggagaggatgttccggctggtcaatgtgcag
tacgagttcagcgacgcctacatggagtgcgtcagccggcacacggatcagctgcagccc
ttcggcgacgtgccccgcaagctccgcattcagctgacgcgggcgttcgtcgccgcgcgc
accttcgtccgcggcctggcgctcatgccggaggtcgtcaacaaagtttcaacggtcaac
gcgtctcccagctgtgtgcgtgcggccatgaagatgttgtactgtccctactgctccggc
caagtggagctgaagccctgccagaattactgtctgaacgtgatgcgtggatgttttgcc
aaccaggccgacttggacacagagtggaacaacttcctcgatgccatgctcagtttagcg
gagaggctcgaaggtccctttaatttcgaatcggtcacggatcccattgacgtgaagatc
tcagaagccatcatgaatatgcaggagaacagcatgcaagtttcacagaaagttttccag
ggatgtgggcagccgaaactgagcatggccttccgttccaaacgtgccgtcaaagaaaca
ggcttcaccggccgcttccgcccctacagccccgacgccagacccaccaccgcagcaggg
accagcttagacagactgacaagtgacgtgaagaagaagctgaaaaacgcaaagaagttc
tggtcaacgttgccagagacggtgtgcacaggtgaaaggattgcacctggggacgactgc
tggaacggaacggcaaaaagcaggtacgagtcggtggtcatcagcagcggactggccaat
caggtgtccaaccctgacgtggacgtggacataacgaagccggacattatgatccgcagc
cagattgcagttttgaaggaaatgactagtaggctgaaagcggcgcacaatggccacgac
atctctatcgaaaacgttggggacgatgaggagagcagcggaggtgaagaaagcggcagc
ggctgcgactcgccatcctgcgacacagaccgggacatgtatttctccactccgccgaac
cccggcaaaccgcgggtcgacccggtgcaggcatcatcggccgtagtcgcctcacaggga
agcatggcgctggcgctctgcgggctcgccctgaccctgctcgccgcccacttgagataa
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