Scomber scombrus (Atlantic mackerel): 133986469
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Entry
133986469 CDS
T10651
Symbol
ebf1a
Name
(RefSeq) transcription factor COE1-A isoform X1
KO
K09103
early B-cell factor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133986469 (ebf1a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133986469 (ebf1a)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
133986469
NCBI-ProteinID:
XP_062282283
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Position
9:complement(22359252..22415628)
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AA seq
599 aa
AA seq
DB search
MFGIHESIQRSGSSMKEEPMVAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTTYIDFVEKEKETTGEKTNNGIHYRLQLLYSNGI
RTEQDLYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVEGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHATPSIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDQERLPKEVILKRAADLVEALYGMPHNNQEMILKRAADIAEALYTTVPRGHN
QLASLGSGSVHAGMMAVNSFTGSEVAQTANQGFSRSTSSVSPHGYVPSSTPQQSSYSSVS
TSMNGYANSGMATLGTSPNFLNGSAGNSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSP
ANMVSAAVKQKSAFAPVVRPQNSPPPTCTSGNGNSLQDQSFVDSSKYSSASSLQGLAFS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcatccacgagagcatccagaggagtgggagtagtatgaaagaagagcccatg
gtggccgggatgaacgcggttcggacatggatgcagggtgccggagtgctggacgccaac
actgccgcccagagcggagtgggtcttgctcgggcacactttgagaaacagccgccctcc
aacctccgcaagtccaacttcttccacttcgtgctggctttgtacgacaggcagggtcag
cctgtggaaatagagagaaccacctacattgattttgtagagaaagaaaaggaaacgacg
ggggaaaagaccaacaatgggatccattatagacttcagctcctttacagtaacgggatc
aggacagagcaggacttatacgttcgtctcattgactccatgactaaacaggcgattatc
tatgaaggccaggataaaaatccagagatgtgccgggttttgttgacccacgagatcatg
tgcagtcgatgctgtgataagaagagttgtggcaacaggaacgagaccccatcagaccct
gtcatcatcgacaggttcttcctcaagttcttcctgaagtgcaaccagaactgcctgaag
aatgccgggaacccgagagacatgaggcgttttcaggtggtagtgtcgactacggtgagc
gtggagggtcatgtcctggccgtgtcagacaacatgttcgtgcacaacaactccaaacac
gggcgccgagctcgaagactggacccctcggaaggcacgccgtcttacctggaacatgca
acccccagcatcaaagccatcagccccagtgaaggctggaccacagggggcgctacagtc
atcatcatcggggacaacttctttgacggcttgcaggtcatctttggaaccatgttggtt
tggagtgagctgatcaccccccatgccattcgagtgcagactccacccagacacatccct
ggggtggtggaggtcacactgtcctacaaatccaaacagttctgcaaaggcacacctgga
cgcttcatctacacagcgctgaatgagccaaccatagactacggcttccagaggttacag
aaggtcatccccagacaccccggagaccaagaaagattacccaaggaggtgatcttaaag
agagcagcagatctggtggaggccttgtacgggatgcctcacaataaccaggagatgatt
ctgaaacgagcagcagatatcgcggaggccctgtatacaacagtgccacgagggcacaac
cagctagccagtcttggcagcggctctgtccatgctggcatgatggccgtaaactccttc
accgggtcagaggtggctcaaacagccaatcagggtttcagtaggagtacaagcagtgtg
tcccctcatggttatgtccccagctccactccccagcagagtagctacagttctgtttcc
actagcatgaatggctacgctaactctggcatggcaaccttgggcacctcgcccaacttc
ctcaatggatctgcaggcaattcgccctatgctatcgtcccgtccagccccactatggcc
tcgtcgaccagcctgccctccaactgcagcagctcctctggcatcttctccttctctcca
gccaacatggtgtcggccgccgtcaagcaaaagagcgcctttgcccccgtcgtgcgacct
caaaactccccaccacccacgtgcaccagcggcaatggtaacagcctgcaagatcagtct
tttgtggactctagcaagtactcatcagccagctctctgcagggcctggccttctcctga
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