Scomber scombrus (Atlantic mackerel): 133987145
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Entry
133987145 CDS
T10651
Symbol
ppih
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase H
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133987145 (ppih)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133987145 (ppih)
03110 Chaperones and folding catalysts [BR:
ssco03110
]
133987145 (ppih)
Enzymes [BR:
ssco01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
133987145 (ppih)
Spliceosome [BR:
ssco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133987145 (ppih)
Chaperones and folding catalysts [BR:
ssco03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
133987145 (ppih)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
133987145
NCBI-ProteinID:
XP_062282386
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All DBs
Position
10:11560963..11574977
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AA seq
202 aa
AA seq
DB search
MRSWIFKLEHYQGNNLDFKHGEIVTMSVQATNPNNPIVFFDITIGGQDVGRMKVELFADV
VPKTAENFRQFCTGEFRKDGVPIGYKGCTFHRVIKDFMIQGGDFVNGDGTGICSIYRGPF
ADENFRMKHSAPGLLSMANSGPGTNGCQFFITCTKCDWLDGKHVVFGKVVDGLLIMRKIE
NVPTGPNNKPKLPILIAQCGEM
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagctggatattcaaacttgaacattatcaggggaacaacttagactttaaacac
ggggaaattgttacaatgtctgttcaagcaacaaatcccaacaacccgattgttttcttc
gacattaccatcggagggcaggatgttggacggatgaaggtggagctgtttgctgatgtg
gttccaaaaacagcagagaatttccggcagttctgcactggagagttcaggaaggatggc
gtccctattggctacaagggttgcacattccacagggtgatcaaagacttcatgatacaa
ggaggggactttgtaaatggtgatggaactggtatctgcagcatctacagaggtccattt
gcagatgaaaactttcggatgaagcattctgcgcctggccttctatccatggcaaacagc
ggtccagggacaaatggttgtcagtttttcattacctgcactaaatgtgactggttagat
ggaaagcatgttgtttttggaaaagtggtcgatggtttgctgatcatgagaaaaattgag
aacgttcctacgggacccaacaataaacccaagctacccatcctcattgcacagtgtgga
gagatgtga
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