Scomber scombrus (Atlantic mackerel): 133987199
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Entry
133987199 CDS
T10651
Symbol
hspa1b
Name
(RefSeq) heat shock 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
ssco04010
MAPK signaling pathway
ssco04141
Protein processing in endoplasmic reticulum
ssco04144
Endocytosis
Brite
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
133987199 (hspa1b)
Spliceosome [BR:
ssco03041
]
Complex B
Other components
Prp19 complex
133987199 (hspa1b)
Complex C
Prp19-CDC5 complex
133987199 (hspa1b)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
133987199 (hspa1b)
Chaperones and folding catalysts [BR:
ssco03110
]
Heat shock proteins
HSP70 / DNAK
133987199 (hspa1b)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
133987199 (hspa1b)
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
133987199 (hspa1b)
Proteasome [BR:
ssco03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
133987199 (hspa1b)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
133987199 (hspa1b)
Exosome [BR:
ssco04147
]
Exosomal proteins
Proteins found in most exosomes
133987199 (hspa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133987199
NCBI-ProteinID:
XP_062282469
LinkDB
All DBs
Position
10:14413069..14415631
Genome browser
AA seq
639 aa
AA seq
DB search
MSSAKGTSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPTNTIFDAKRLIGRKFNDQVVQSDMKLWPFKVISDNGKPKVQVDYKGETKAFYPEE
ISSMVLVKMKEIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVISGLNILRIINEPTA
AAIAYGLDKGKRGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV
NHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSIT
RARFEELNSELFRGTLEPVEKALQDAKLDKSKIHEIVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILMGDTSENVQDLLLLDVAPLSLGIETAGGVMTSLIKRNT
TIPTKQTQIFSTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQVEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQDADKYKAEDNIQRDKIAA
KNSLESYAYNMKSSVEDDNMKGKISEADKKMVIDKCNQTISWLENNQLAEKDEYEHQQKE
LENMCKPIVTKLYQGAAPSGGCGSQAGSSSKGPTIEEVD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggctaagggaacctccattggcattgatctgggcaccacctactcttgcgtt
ggcgttttccagcatggcaaagtggagattattgccaacgatcagggcaataggaccact
cccagctatgtggcctttactgacacagagaggctcattggagatgctgccaagaaccag
gtggctatgaacccaaccaacacaatctttgatgccaaacggctcattggaagaaagttt
aatgaccaggttgtccagtctgacatgaaactctggcctttcaaagtgatcagtgataac
ggaaagccaaaagtccaggtggactataaaggtgagaccaaggccttttatccagaggaa
atctcctccatggtcctggttaaaatgaaggagattgctgaggcctacctgggacagaaa
gtgtccaatgcagtcatcacagttccagcatattttaatgactctcaaaggcaagccacc
aaggatgctggggtgatatctgggctgaatattctgaggatcattaacgagcccacagca
gcagccatcgcttatggtttagacaaaggtaaaagaggagagcgcaatgtactcatcttt
gatcttggtggaggcacctttgacgtgtccatcctgacaattgaggacggcatatttgag
gtgaaatccaccgcaggagacacacaccttggtggagaggactttgacaacaggatggtc
aaccactttgtagaggaatttaaaaggaaacacaagaaggatatcagccaaaataagaga
gcagtaaggagactccgtacagcttgtgagagagcaaagagaaccctttcctccagcacc
caggccagccttgagatcgactctctgtttgagggcatcgacttctacacttccatcacg
agggcacgatttgaggagctcaactctgagctcttcaggggaacactggagccagttgag
aaggccctgcaagatgccaagctggataagtccaagatccatgagattgtcctggttggt
ggctccacaagaattcccaaaatccagaagctcttgcaggacttctttaacggtagagaa
ctgaacaagagcatcaatccagatgaagcagtagcatatggggcagcagtccaggctgca
atcctcatgggtgacacttcagagaacgttcaggatcttctgctgctggatgtggctcca
ctgtctctgggtattgaaactgcaggtggagttatgacatctctaatcaaacgcaacact
accatccctaccaaacagacccagatcttctccacatactcagataaccaaccaggcgtc
ctgattcaggtgttcgagggtgagagggccatgaccaaggacaacaacctcctgggcaag
tttgagctctcgggtatcccccctgctccccgtggcgtaccacaagtggaggtgactttc
gacatcgatgccaatggcattctgaatgtgtctgccgtggacaaaagcaccggcaaagaa
aacaaaatcaccatcaccaatgacaaggggcgcctcagcaaagaggagatagagcggatg
gtacaggacgctgacaagtacaaagctgaggacaacatacagagggacaaaattgcagca
aagaactcactggagtcttacgcctacaacatgaagagcagtgtcgaggacgataatatg
aaagggaagattagcgaggcagataaaaagatggtcattgacaagtgcaaccagactatc
tcctggcttgagaacaaccagctggccgagaaagatgaatatgagcatcaacagaaggaa
ctagagaatatgtgcaaaccgattgtgaccaagctgtatcagggagcagcaccatcagga
ggctgcggcagccaggcgggcagcagctctaagggccccactattgaggaagtggactaa
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