Scomber scombrus (Atlantic mackerel): 133987252
Help
Entry
133987252 CDS
T10651
Symbol
krt18a.1
Name
(RefSeq) keratin, type I cytoskeletal 18
KO
K07604
type I keratin, acidic
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133987252 (krt18a.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133987252 (krt18a.1)
04147 Exosome [BR:
ssco04147
]
133987252 (krt18a.1)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
133987252 (krt18a.1)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
133987252 (krt18a.1)
Exosomal proteins of other body fluids (saliva and urine)
133987252 (krt18a.1)
Exosomal proteins of colorectal cancer cells
133987252 (krt18a.1)
Exosomal proteins of melanoma cells
133987252 (krt18a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC39
TPR_MLP1_2
DUF4407
DUF4875
DUF6236
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
133987252
NCBI-ProteinID:
XP_062282543
LinkDB
All DBs
Position
10:complement(5666711..5673092)
Genome browser
AA seq
440 aa
AA seq
DB search
MKTSKQSTYSVRSSTSSRPSAVSITRTSTGPVYRAPTIHGGAGGSRISISSSVRSGLGAG
MGMGMGMGMGSGAGGFSSSTQVSGNSGDIMGNEKFAMQNLNDRLANYLETVRNLEQANHK
LEIKIKEALEKSGPDFRDYSKYQAILDDLRRKVFDATTDNARLVLNIDNARLAADDFRVK
YESELAIRQSVEADIIGLRKVIDDTNMSRMNLESEIESLKEELIHLKKNHENEVMELRNQ
IAQSGVHVDVDAPKGQDLAQIMAEIRAKYEKMAQKNQEELKAWHETQITEVQSQVIQNTE
ALKGSQTEVNDLRRQLQTLEIELESQKSLKGSLDGTLRDTEMRYNMEIESLNSVLLGLEA
ELTQLRNNIQLQTQEYETLLNMKMKLEAEIATYRRLLDGEDFTLQDALEDQKTVKTKVMT
VTQTLVDGKVVSSSTETKNL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctctaagcaaagtacatactctgtgcgctcctcaaccagtagcaggccttct
gctgtatccatcacccgtacctctacagggcctgtctacagggcccccactatccacggt
ggggccggtgggtcccgcattagcatctcctcaagcgtgcgcagtggcctgggagccggt
atgggaatgggaatgggaatgggaatgggctccggagcagggggcttctccagcagcacc
caggtgagcgggaacagcggagacatcatgggcaacgagaagtttgccatgcagaacctg
aacgaccgtctggccaactacctggagactgtgaggaacctggagcaggccaaccacaag
ctggagattaagatcaaggaggccctggagaagagcggacctgacttcagagactacagc
aagtaccaggccatattggacgacctgaggaggaaggtgtttgatgccaccaccgacaat
gcccgcctggttctcaacatcgacaacgctcgcctggcagctgatgacttcagagtgaaa
tatgagtcagagctggctatccgccagtctgtggaggctgatatcattggtctgaggaag
gtcattgatgacaccaacatgagccgcatgaacctggagagtgagattgaatccctgaag
gaagagctcatccacctcaagaagaaccatgaaaatgaagttatggagctccgtaaccag
atcgcccagtcaggagtccatgtggatgttgatgctcctaaaggacaggacctggctcag
atcatggcagagataagggccaagtatgaaaagatggcacagaagaaccaggaagaactc
aaagcatggcacgaaactcagataacagaagtgcagtcccaggtcattcagaacacagag
gccctgaagggttcccagacagaggtcaatgacctgcgcagacagttgcaaaccctggag
atcgagctggagtcacagaagagcctgaaaggatctctggatggcacactgagggacaca
gagatgcgttacaacatggagatcgagtctctcaactccgtcctcctgggtctggaggca
gagctcacacagctgcgtaacaacatccagctgcagacacaggagtacgagaccttgctc
aacatgaagatgaagctggaggcagagattgcaacatacagacggctgctggacggggaa
gacttcacgctccaggacgctctggaagaccagaaaacagtgaagaccaaagtcatgact
gtcacgcagaccctggtggacggcaaggtggtttcctccagcacagagaccaagaacctc
taa
DBGET
integrated database retrieval system
