KEGG   Scomber scombrus (Atlantic mackerel): 133987296
Entry
133987296         CDS       T10651                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:ssco01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     133987296 (kdm5bb)
Protein phosphatases and associated proteins [BR:ssco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133987296 (kdm5bb)
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    133987296 (kdm5bb)
SSDB
Other DBs
NCBI-GeneID: 133987296
NCBI-ProteinID: XP_062282591
LinkDB
Position
10:complement(25028078..25043978)
AA seq 1547 aa
MLSCPKTMSEPRPDEFKPPPECPVFEPSWEEFEDPYAFINKIRPIAEKTGICKVRPPPGW
QPPFACDVDRLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCALKIPHVERKILDL
YKLNKLVADEGGFDIVCQGRRWTKIAIQMGFAPGKAVGSHLRGHYEKILYPYNLFQSGTN
LLAPEAASKLMRLEADPEFEKYVQKPVQPAERAESMDSPDTKEQKLQDQRQSIMMPESYP
GARRAKRMKCENICVKTEPGEPGDSKPNLRRRMGSFVAKPEPEKEIPIPVKQEPVEIKEP
IIEPDKTKQRYKKYLPPVPPSPVDLVVCLMCGSGGDEDRLLLCDGCDDSYHTFCLIPPLH
DVPRGDWRCPKCLAQECSKPHEAFGFEQAYRDYSLRAFGQMADAFKSDYFNMPVHMVPTE
LVEKEFWRLVGAIEEDVTVEYGADIASKEFGSGFPIPNGRFKVSPADEKYLKCGWNLNNL
AMMNPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPG
FAAEQLENVMKKLAPELFESQPDLLHQLVTIMNPNTLMDHGVPIYRTNQCAGEFVITFPR
AYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRILHRYNVFSHDEMVCNMASKADTLD
VVLASSVHRDMVVMIREEKQLRDKVKKMGMLRSQEAKYDDLQDDERQCVKCRTTCYLSAV
TCPCSPGMLVCLHHLADLCSCPITNYTLNYRFTLDDLLPMVSAVKERSELYDSWASRVSE
TLEAKLEKKKGLPVFRSLLSESESERFPENDLLRRLRLVTQDADKCSLVAQQLLNGKRQT
RYRCGTVKSRSQLTVEELSSFVRQLYNLPCSLPQAPLLKELLNRIEDFQQHSEKVLADEV
PSVSEIQDLLDVSFDFDVELPELPRLRVRLEQARWLEGVQQASAQPSTLTLETMRRLIDQ
GVGLAAHPSVEKAMARLQELLTVSEHWEDKASSLLKARPPHSIETLSAAAEKASGIPAYL
PNCLLLKDTIRKAREWLQEAEELQASGCILLVDSLSDMVLRGQAIQVHLEPLDRLESLMV
EVQEWKESTVATFLQKVSSLSLLEVLCPRCEVGNMGSPKRRAKKGKESPKTNKKKTPRLN
TLTDVEKALSETKDSTSAMATLEELRMREMEAYSTLRAANESKLLPTADCMDLKVCVCQK
APMGAMLQCELCRDAFHSVCVRDPSDSCETQPWLCPQCQRSEKPPLNKVLPLLASLRHIG
VRLPEGDALDYLVERTVDWQHRAQEISHSFNLPELEERPGTPPTLTRWASSSNETQNNTQ
APCLTPEWNRTSHAQTVFYTEQRCIPLQGLSQELEELMVEGLLLQVSLPEVQSLYHVLLD
RATSQHTNRCMSPSQDDSDCDNHVQFNSQGKNLQLNQDDVNSVRESTTGSEKKVKRHLER
ESPDVEHRGKDKKHSHKRQKINKKRPASTSSSLRSDFSQSDDSDEEMAVCPAERCQLPEG
DEVDWVQCDGSCNQWFHQVCVGVTPEMAEKEDYICVRCTLNDGRVRK
NT seq 4644 nt   +upstreamnt  +downstreamnt
atgctgtcctgtccgaaaacgatgagcgagcctcggccggacgagttcaagcctcccccg
gagtgcccggtcttcgaacccagctgggaagaatttgaagatccctatgctttcatcaat
aagatccgtccgatcgccgagaaaacgggcatctgcaaagtgcggccgcctccgggttgg
cagcctccatttgcatgcgatgttgacagacttcactttgttcctcggatccagaggctc
aatgagctggaggcacaaaccagagtcaagctcaacttcttggaccagattgccaaattt
tgggatttgcagggatgtgcccttaagattcctcatgtggagaggaagattttggattta
tataagctaaataagctggtagcagatgagggtggattcgacattgtctgtcagggcagg
cgatggaccaagattgcaatacagatgggcttcgcccctggcaaagctgtcggctcacac
ctgcgagggcattatgagaaaatcctctatccctacaatctctttcagagtggaacaaac
ctcctggcaccagaggcagcttccaaactgatgcgtttggaggctgatcctgaatttgaa
aagtatgttcagaagccggtccagccagcggagagggcagaaagcatggacagccctgac
accaaggagcagaagctgcaggaccagaggcagtccatcatgatgcctgagagctacccc
ggtgctcggagagccaagcgcatgaagtgtgagaacatctgtgtgaagactgaaccaggt
gagccaggcgacagcaagccgaacctgaggcggaggatgggctcttttgttgccaagcca
gagccagaaaaagagattcccattccagtcaaacaggaacctgttgaaattaaggaacca
ataatcgaacctgacaaaaccaagcaacggtacaagaaatacctccctccagttcctccg
agtccagtggatctggttgtgtgtctgatgtgtggcagcgggggagatgaagaccgtctg
ttgctgtgtgacggctgtgacgacagctaccacaccttctgcctgatccctcctctacac
gacgtccccagaggagactggagatgtcccaagtgtttggctcaggaatgcagcaaacct
catgaggcgttcggctttgagcaggcgtacagagattattccctgcgtgcatttgggcaa
atggctgatgcattcaaatctgattacttcaacatgccagttcatatggtacctacagag
ctggtggagaaagagttctggcgcctggtgggagccatcgaggaggatgttactgtagaa
tatggagcagatattgcctcaaaggagtttgggagcggattccccattcctaatggaaga
tttaaagtttccccggccgatgagaaatacctcaagtgtggctggaacctcaacaacctg
gcgatgatgaacccttctgtcctgactcatgtgacagctgacatctgtgggatgacgctg
ccgtggctttatgttggcatgtgcttctcctccttctgctggcacatcgaggatcactgg
agttactccatcaactacctccactggggggaaccaaaaacctggtatggagctcctggt
tttgccgcagagcagctggagaatgtgatgaagaaactggccccagagctgtttgagtct
cagcctgacctgcttcaccagctggtcaccatcatgaaccccaacaccctgatggaccac
ggagtcccaatttacagaacaaaccagtgtgctggtgagtttgtcatcacgtttccgaga
gcctaccacagcggcttcaatcagggtttcaacttcgctgaggcggttaatttctgcacg
gttgattggatgcctctcggcaggcagtgtgttgaccactatcgaatactgcaccggtac
aatgtgttctcccatgatgagatggtgtgcaacatggcttcgaaggcagacacgcttgat
gttgtcctggcgtcgtctgtccacagagacatggttgtcatgatccgagaagagaagcag
ctcagagacaaagtgaagaaaatggggatgctgcgtagccaggaggcgaaatatgacgat
ctccaagacgacgagcggcagtgtgtcaagtgcaggaccacctgctacctgtctgccgtc
acctgtccctgcagcccaggaatgctggtgtgtctacaccaccttgccgatctctgctcc
tgccccatcaccaactacacactgaattacagattcacactggacgacctgttacccatg
gtgagcgctgtgaaggagcgatctgaactgtatgacagctgggcctcccgtgtgtcagag
actctggaggctaagctggaaaagaagaaaggcctgcccgtctttcgctcccttctttct
gaatcagagtccgagcggttccctgaaaacgacctgctgcgtcggttacgtctggtcaca
caagatgcagacaaatgctcgttggtggctcagcagctactgaacggcaagaggcagacc
agatatcggtgtggaactgtgaaatcccggagccagctgacggtagaggagctgagttca
tttgtgcggcagctgtataaccttccctgcagtcttcctcaagccccgctgctgaaggag
ctcttgaatcgcatcgaagacttccagcagcacagtgagaaggtcctggcagatgaagtt
cccagcgtcagcgagatccaggacctgttagacgtcagcttcgacttcgacgtggagctg
ccggagctgcctcgcctcagagtgaggctggagcaggcacgctggctggaaggggtgcag
caggccagcgcccagccctccaccctgacactggagaccatgaggaggctcatcgaccag
ggagtcggcctggcggctcatccgtccgtggagaaagccatggcacgccttcaggagctg
cttactgtgtccgagcactgggaggacaaggcgagcagtctgctgaaagccagaccgcca
cactccattgagaccctcagtgctgctgccgagaaagcatccggcatccccgcttacctc
ccaaactgtctcctactgaaagacaccatcagaaaagccagagagtggcttcaggaagca
gaggagcttcaggccagtggctgcattctgttggtggacagtctgtctgatatggttcta
cgaggacaagccattcaggtccacctggagcctttggacaggttggagtctttaatggtt
gaagtgcaagaatggaaagaatccacagttgcaacgttccttcagaaagtctcgagcctc
agcctactggaggtcctgtgtccaagatgtgaggttggaaatatgggttctccaaagcgg
agggccaagaaagggaaagaatcacccaaaactaacaaaaagaaaacaccaaggctcaac
actctcacagacgtggaaaaggcgctttcagagaccaaggattctacctctgcaatggca
actctggaggagcttcggatgagagagatggaggcttactctactctcagggcagcaaat
gagtcaaagctccttcccacagcggactgcatggacctgaaggtgtgcgtctgtcagaag
gcgcccatgggtgcgatgctgcagtgtgaactctgcagggacgcgttccacagcgtgtgc
gtccgagacccttcggactcctgcgaaacacagccgtggctttgcccgcagtgccagcga
tcagaaaagccccccttgaacaaagtcctccctctgctagcgtctctgcggcacataggt
gtgcgcctgccggagggcgacgcgctggactatctggtggagaggacggttgactggcag
catcgagctcaagagatctcacattctttcaatctaccagaactggaagagcgaccggga
actcctccgactctcacacgctgggcgtcaagcagcaacgaaactcaaaataacactcag
gctccttgtttgactccagagtggaataggacaagccatgctcagactgtcttctacacc
gagcagagatgcataccgctgcagggtctgagtcaggagctggaggagctgatggtggag
gggctcctgctgcaggtgtctctgcctgaagtccagagtctctaccacgttttattggac
agagccaccagccagcacacaaacagatgcatgtcgccatcgcaggacgattcagactgt
gacaaccacgtgcagtttaactctcagggaaaaaatctgcaactgaaccaggacgatgtc
aatagtgtgagggaatctacgactggctcagaaaagaaagtgaagcggcatctggagagg
gaaagtccagatgtagagcacagagggaaagacaaaaagcactctcacaaaagacagaag
atcaataaaaagaggccggcctccacctcgtcctctctgcgctctgatttctcccagtcc
gacgactctgatgaggagatggccgtgtgtccagcggagaggtgtcagctcccagagggc
gacgaggtggactgggtccagtgcgacggcagctgtaaccagtggttccaccaggtctgc
gttggcgtcacgcccgagatggcagagaaggaggactacatttgcgtcaggtgtacactg
aacgacggccgtgtgagaaaatga

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