Scomber scombrus (Atlantic mackerel): 133987352
Help
Entry
133987352 CDS
T10651
Symbol
samd4a
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133987352 (samd4a)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
133987352 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
133987352
NCBI-ProteinID:
XP_062282704
LinkDB
All DBs
Position
1:complement(33271954..33342134)
Genome browser
AA seq
721 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELQVLEG
EANNPGVISQWQSEPKERVISLVLTHLPLLKPGNVEAKGEYMRLLPRILAHTIEHGHHLE
ESRQLLSYALIHPATSLEDRAALALWLNHLEERAAARGDSLERPPPSGPHHHHQSTPPST
LTSSGSSSSSTNNSSSGNLYSLHHHQRYGSDDRLNGWQSSRDSGLGGGWHQQQQGCENGH
LLLYPSSSVPATINTVGTGGNTILTSGGGSQQHSPLKRSVSLTPPMSGPSNQSLGHVWLS
QEDLPTARGPALDHAPLSPQSSIASSGSGGSEHLEEAGLGGGSSLHRSSFHEEGSGMRDV
PAWLKSLRLHKYAALFSTLTYDEMMSLTEEQLEAQKVTKGARHKIVISIQKLKERQNLLR
SLEKDVLEGSNLRAPLQELHQMIMTPIKAFSGGEEASLQRPLLTSEGKSVAPGSHLAGGG
GEAESGTSLIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNISSYLQLIDKCLIHESFTETQ
KKRLLSWKQQVQRLFRSIPRKTLLDIAGYRPQRSRGFGQSNSLPTSSCVGSSVAARRSLR
QFQMPSRSLPGARLSLLGSGGLLGPTPRSSSSTPTGPKQGRQGLWFANPVRQQQHAQSTH
SSVQRTRSLPXHTTPQTMVMFQQADLQLPVTEPDINNRLESLCLSMTEHALGDGADRTST
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgatcaggtgggcgtgttagccagctggttcaaggggtggaatgagtgc
gagcagacggtggctctgctgtccctgttgaagagggtgagccggacccaggcccgcttc
ctgcagctctgtctggagcactctctcgctgagtgcaccgaactgcaggtcctggaggga
gaggccaacaacccaggtgtgatcagccaatggcaaagcgagccgaaggaacgcgtcatc
tcgctcgtcctcacccatctcccgctcctcaaacccggcaacgtagaagcgaagggtgag
tacatgcgcctgctgcctcgcatcctggcccacaccatcgagcacggccaccacttggag
gagtcccgccagctcctttcctacgccctcatccaccccgccacctccctagaggaccgc
gccgccctggcgctctggctcaaccacctggaggagagggcggccgccaggggagactcc
cttgagaggccgcctccctcgggtcctcatcaccaccaccagtccacacctccatccact
ctcacttcgtcaggatcctcctcttcctccaccaacaactcttcgtcaggaaacctctac
tctttgcatcaccaccagcgctacggctcggacgaccgcctcaacgggtggcagagctcc
agggactctgggctgggcggaggctggcatcagcagcagcagggctgtgagaacgggcac
ctgctgctttacccgtcgtcctctgtgccggcaactatcaatacggtgggaaccggcggt
aacactatcctgacgagcggaggcggcagtcagcagcacagtcccctgaagcgctccgtg
tctctcacccctccgatgagcggccccagcaaccagtctctgggccacgtctggctctct
caggaggacctaccgaccgccagaggccccgccctggaccacgcgcccctgtcgccccag
agcagcatcgcctcctcgggtagcggaggcagcgagcacctggaagaggccggtttagga
ggaggctcaagtctgcatcgtagctccttccacgaggagggcagcggcatgagagatgtt
cctgcgtggctgaagagtctccgtctccacaagtatgctgcgctcttctccaccttgacc
tacgatgagatgatgtcactgactgaagagcagcttgaagcacagaaagtcaccaaagga
gcaagacataagattgtcatcagcattcagaagctcaaagagaggcagaacctcctacgc
agcctggaaaaggacgtgttggagggcagtaatctgcgtgccccgctgcaggaactccac
cagatgatcatgacacccatcaaggctttcagtggtggtgaggaggcctccctgcagcgc
ccccttctgacctcagagggcaaaagcgtcgcacctggctcccacctggcaggaggcgga
ggggaagctgagtcaggcaccagcctgattgcagagggggatctacctggccagttcact
cgtgtcatgggcaaagtttgcacccagctgctggtgtcgaggtcagacgaggacaacatc
agctcctacctacaactcatcgacaagtgccttatccatgagtccttcactgagacgcag
aagaagaggctgttgtcatggaaacaacaggtccagaggctgttccggtccattcctagg
aaaaccctccttgacatagcagggtaccgaccgcagaggagccgtggattcggccagtcc
aactctctccccacctctagctgtgttgggagcagcgtggcggccaggaggagccttcgc
cagttccagatgccctccaggagcctgcctggtgccaggctgagcctgctgggcagcggg
gggcttctgggacccacacctcgcagctccagcagcacacccaccggccccaaacagggg
agacaaggtctgtggtttgccaaccccgtgaggcagcaacagcatgcccagtcgacccac
agctccgtgcagcggacccgctccctgccgnttcacactacgccacaaaccatggtcatg
ttccagcaagccgatcttcagttaccagtgacggagccagacatcaacaatcgccttgag
tccctgtgtctgagtatgacagagcacgccttgggagacggagccgaccgcacatcaaca
atatga
DBGET
integrated database retrieval system
