Scomber scombrus (Atlantic mackerel): 133987423
Help
Entry
133987423 CDS
T10651
Name
(RefSeq) serine/arginine-rich splicing factor 6-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133987423
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133987423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133987423
Spliceosome [BR:
ssco03041
]
Common components
Common spliceosomal components
SR proteins
133987423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
133987423
NCBI-ProteinID:
XP_062282775
LinkDB
All DBs
Position
10:complement(11140022..11145215)
Genome browser
AA seq
372 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLAEVDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGHGGGYLGGGRSSGYSSRSRTGRDKYGPPVRTEYRLVVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSQSDMKRALDKLDGTDINGRKIRL
VEDRPRRRRSYSGSRSRSRSHRRSRSRSRRSQRSRSSRSHSRSHSRSRSRSNKRRRHSRS
RSGRKSRSKSGESKSRSRNRKSRSRSRKSKSRSRSHKSRSRSAERKSKSRSKSRSKVKSE
RDSRSRSKEMSVDKKSRSRSASPVENGKEERAAKSASRSPSPQEDDRRSKSREKRSASRS
KSRSRSRSASHD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtttatatcggacggctgagctaccatgtccgcgaaaaagacatccagaga
ttcttcagcggatatggaaagctcgcggaggtcgatttaaagaatggctacggatttgtg
gagtttgaagacaaccgagacgccgacgacgccgtgtacgagctgaacgggaaggagctg
tgcggggagcgggtgatcgtcgagcatgcccgcggaccgcggcgagaccgagatggccac
ggtgggggttacttgggtggtgggcgcagtagcggttacagcagccggagtcgcactggc
agggataagtatggacccccagtccgtactgagtaccgtctggttgtggagaacttgtcc
agccgctgcagttggcaggacctgaaggacttcatgcgtcaggcaggagaggtgacttat
gcagatgcacacaaggagcgcaccaacgagggagtcatcgagttccgttcccaatcggac
atgaagagggctttggacaagctggatggaaccgacatcaatggaagaaagattcgtcta
gtggaggaccggcctcgccgccgaaggtcttactctggcagccgctccagatctcgcagc
caccgccgctcccgcagcaggagccgtagaagccaaaggagcaggagctccaggagccac
tccagatcccactccaggtctcgttctcgtagcaacaagagacgtcgtcattcccgctca
agatctggaaggaagtctcgctccaagtcaggagaaagcaaatcacgctctcgcaaccgc
aagtcccgttctcgatcccgcaaatccaaatctcgttcacgctcccacaaatccaggtct
cgctcggctgaacgtaaatctaagtcccgttcaaagagccgctcaaaggtaaagtctgaa
cgggattcccgtagtcgatccaaggagatgtccgtcgacaagaagtcccgcagtcgttca
gcctccccagtggagaacgggaaggaggagcgcgctgcaaaatctgcctcccgctccccg
tccccacaggaggatgaccgccggtccaagtcgagggaaaaacgctcagcctctcgctca
aagtcccgctcaaggtctcgatcagcttctcatgattag
DBGET
integrated database retrieval system
